Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G17760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4835 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1611 Anthoceros agrestis
Actinidia16522 Actinidia chinensis
AL6G19620 Arabidopsis lyrata
Aqoxy6G00314 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5W1UEZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6R2FG Arachis hypogaea
AT5G09230 Arabidopsis thaliana
ATR0584G010 Amborella trichopoda
Atru.chr4.999 Acer truncatum
AUR62000523 Chenopodium quinoa
AUR62006868 Chenopodium quinoa
BcaB05g21563 Brassica carinata
BcaB05g22515 Brassica carinata
BcaC03g13245 Brassica carinata
BolC2t06338H Brassica oleracea
BraA02t04972Z Brassica rapa
C02p03770 Brassica napus
CAN.G186.1 Capsicum annuum
CANSAT01G1027 Cannabis sativa
CARHR204190 Cardamine hirsuta
Carub.0006s0779 Capsella rubella
Ca_16984_v3 Cicer arietinum L.
Ca_16985_v3 Cicer arietinum L.
Ca_28148_v3 Cicer arietinum L.
Ca_28522_v3 Cicer arietinum L.
Cc07_g19330 Coffea canephora
Cc07_g19340 Coffea canephora
CDE08G1654 Ceratophyllum demersum
Cfa002199 Carpinus fangiana
Cfa024772 Carpinus fangiana
Cfa025450 Carpinus fangiana
Ciclev10001356m.g Citrus clementina
CiPaw.04G079300 Carya illinoinensis
ClCG02G000280 Citrullus lanatus
COL.COLO4_35820 Corchorus olitorius
Cpa.g.sc37.11 Carica papaya
Cre05.g234663 Chlamydomonas reinhardtii
Cre12.g524650 Chlamydomonas reinhardtii
CsaV3_2G019560 Cucumis sativus L.
CSS0011153 Camellia sinensis var. sinensis
DCAR_009593 Daucus carota
Dinv16327 Davidia involucrata
ECA248G1240 Erigeron canadensis
ECA248G3451 Erigeron canadensis
EL10Ac4g09631 Beta vulgaris
Eucgr.I00120 Eucalyptus grandis
Eucgr.I00121 Eucalyptus grandis
FAN19G0175 Fragaria x ananassa
FAN23G0434 Fragaria x ananassa
FAN26G2810 Fragaria x ananassa
FAN28G1123 Fragaria x ananassa
FvH4_1g24990 Fragaria vesca
Glyma.04G210000 Glycine max
Glyma.06G156000 Glycine max
Gohir.A05G381400 Gossypium hirsutum
Gohir.D04G033900 Gossypium hirsutum
Gorai.012G038200 Gossypium raimondii
GSVIVG01022342001 Vitis vinifera
HanXRQChr01g0019111 Helianthus annuus
HPP92_011392 Vanilla planifolia
Hund07233 Selenicereus undatus
Lalb_Chr11g0068621 Lupinus albus
Lj1g0019812 Lotus japonicus
Lj7C583G3 Lonicera japonica
Lsat_1_v5_gn_7_106341 Lactuca sativa
Manes.12G147700 Manihot esculenta
Manes.12G159200 Manihot esculenta
Mapoly0093s0042 Marchantia polymorpha
Mapoly0113s0054 Marchantia polymorpha
MBI03_g28480_MAGBIO Magnolia biondii
MCO15G064 Micromonas commoda
MD00G1091800 Malus domestica
Medtr3g096710 Medicago truncatula
MELO3C023217.2 Cucumis melo
MELO3C027223.2 Cucumis melo
MELO3C028228.2 Cucumis melo
MELO3C028691.2 Cucumis melo
MELO3C029389.2 Cucumis melo
MELO3C029498.2 Cucumis melo
MELO3C031906.2 Cucumis melo
MELO3C033631.2 Cucumis melo
MELO3C035391.2 Cucumis melo
Migut.H00828 Erythranthe guttata
MSTRG.23485 Avicennia marina
Nitab4.5_0004105g0030 Nicotiana tabacum
Nitab4.5_0010993g0010 Nicotiana tabacum
Nn1g08970 Nelumbo nucifera
Oeu037858.1 Olea europaea
Os12g0179800 Oryza sativa ssp. japonica
Peaxi162Scf00842g00217 Petunia axillaris
PGR119G2343 Punica granatum
PGSC0003DMG400032556 Solanum tuberosum
Phvul.009G154300 Phaseolus vulgaris
Potri.005G068400 Populus trichocarpa
Pp3c16_14390 Physcomitrium patens
Pp3c17_22290 Physcomitrium patens
Pp3c24_11160 Physcomitrium patens
Prupe.4G275900 Prunus persica
Psat5g060320 Pisum sativum
PSO541G2210 Papaver somniferum
PSO675G6061 Papaver somniferum
QL05p088935 Quercus lobata
QL05p089323 Quercus lobata
QL10p041184 Quercus lobata
QL10p041201 Quercus lobata
QL10p041477 Quercus lobata
RcHm_v2.0_Chr2g0122631 Rosa chinensis
Rhsim08G0000300 Rhododendron simsii
Sabra05G0055900 Salix brachista
Sc16g0009550 Simmondsia chinensis
Sed0027545 Sechium edule
SEGI_00039 Sequoiadendron giganteum
SEGI_01044 Sequoiadendron giganteum
SEGI_20574 Sequoiadendron giganteum
SGA_v2.0_scaffold20G08952 Striga asiatica
SMO115G0270 Selaginella moellendorffii
SMO165G0022 Selaginella moellendorffii
Solyc04g009430.3 Solanum lycopersicum
Sopen04g004560 Solanum pennellii
Sp6g34070 Schrenkiella parvula
TAR625G0433 Trochodendron aralioides
THA.LOC104818419 Tarenaya hassleriana
Thecc.01G137800 Theobroma cacao
Thhalv10013744m.g Eutrema salsugineum
TPR.G33548 Trifolium pratense
TWI73G0041 Tripterygium wilfordii
TWI75G1840 Tripterygium wilfordii
unitig_52.g17615 Utricularia gibba
vmacro18686 Vaccinium macrocarpon
vmacro18687 Vaccinium macrocarpon
VMungo1309G1065 Vigna mungo
VMungo1309G1915 Vigna mungo
Zm00001eb408300 Zea mays

User provided reference genes

Program Settings