Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12030 Brassica napus
A10p09750 Brassica napus
Aa31LG7G12880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis
Actinidia38859 Actinidia chinensis
Ah.03g146500 Amaranthus hybridus
Ah.04g160050 Amaranthus hybridus
AL792U10010 Arabidopsis lyrata
AL8G26290 Arabidopsis lyrata
AL8G32330 Arabidopsis lyrata
Aqoxy3G01116 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea
AT5G51960 Arabidopsis thaliana
ATR1096G048 Amborella trichopoda
Atru.chr12.636 Acer truncatum
AUR62004768 Chenopodium quinoa
AUR62037483 Chenopodium quinoa
BcaB05g23952 Brassica carinata
BcaB08g35550 Brassica carinata
BcaC03g14561 Brassica carinata
BcaC04g20616 Brassica carinata
BolC2t08139H Brassica oleracea
BolC9t57024H Brassica oleracea
BraA02t06267Z Brassica rapa
BraA10t43055Z Brassica rapa
C02p20090 Brassica napus
C09p41470 Brassica napus
CAN.G79.77 Capsicum annuum
CANSAT11G0923 Cannabis sativa
CARHR264900 Cardamine hirsuta
Carub.0008s1205 Capsella rubella
Ca_19066_v3 Cicer arietinum L.
CBR_g23899 Chara braunii
Cc00_g19060 Coffea canephora
CDE10G1261 Ceratophyllum demersum
Cfa019629 Carpinus fangiana
Ciclev10033129m.g Citrus clementina
CiPaw.15G145100 Carya illinoinensis
ClCG08G001190 Citrullus lanatus
Cpa.g.sc53.20 Carica papaya
CsaV3_3G030820 Cucumis sativus L.
CSS0044562 Camellia sinensis var. sinensis
DCAR_015273 Daucus carota
Dinv04676 Davidia involucrata
Dinv11808 Davidia involucrata
Duzib106G1131 Durio zibethinus
Duzib114G0063 Durio zibethinus
ECA238G0308 Erigeron canadensis
EL10Ac3g06003 Beta vulgaris
EL10Ac5g11654 Beta vulgaris
EL10Ac6g13227 Beta vulgaris
EL10Ac7g15953 Beta vulgaris
EL10Ac7g17935 Beta vulgaris
Eucgr.G02800 Eucalyptus grandis
FAN01G0677 Fragaria x ananassa
FAN03G2322 Fragaria x ananassa
FAN06G3582 Fragaria x ananassa
FAN10G3796 Fragaria x ananassa
FvH4_7g20160 Fragaria vesca
Glyma.05G164400 Glycine max
Glyma.08G121800 Glycine max
Glyma.19G087500 Glycine max
Gohir.A01G133200 Gossypium hirsutum
Gohir.D01G118000 Gossypium hirsutum
Gorai.002G143500 Gossypium raimondii
GSVIVG01016339001 Vitis vinifera
HanXRQChr14g0436521 Helianthus annuus
Haze_18895 Corylus avellana
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla
HPP92_016041 Vanilla planifolia
Hund18453 Selenicereus undatus
Lalb_Chr07g0186081 Lupinus albus
Lj3g0006677 Lotus japonicus
Lj3g0023846 Lotus japonicus
Lj4g0006534 Lotus japonicus
Lsat_1_v5_gn_2_46180 Lactuca sativa
Manes.10G042600 Manihot esculenta
Mapoly0006s0175 Marchantia polymorpha
MBI19_g17999_MAGBIO Magnolia biondii
MBI19_g25006_MAGBIO Magnolia biondii
MD01G1131200 Malus domestica
MD07G1179300 Malus domestica
Medtr6g068850 Medicago truncatula
Migut.F01798 Erythranthe guttata
MSTRG.8164 Avicennia marina
Nitab4.5_0000061g0170 Nicotiana tabacum
Nitab4.5_0001721g0080 Nicotiana tabacum
Nn5g30302 Nelumbo nucifera
Oeu017232.1 Olea europaea
Oeu057236.1 Olea europaea
Oeu057237.1 Olea europaea
Os11g0133900 Oryza sativa ssp. japonica
Os12g0131266 Oryza sativa ssp. japonica
Peaxi162Scf00111g00718 Petunia axillaris
Peaxi162Scf00373g00210 Petunia axillaris
PGR142G0594 Punica granatum
PGSC0003DMG400022164 Solanum tuberosum
Phvul.002G244400 Phaseolus vulgaris
Potri.008G044200 Populus trichocarpa
Potri.010G217300 Populus trichocarpa
Pp3c3_10790 Physcomitrium patens
Prupe.2G218400 Prunus persica
Prupe.2G218600 Prunus persica
Psat1g119080 Pisum sativum
PSO675G6920 Papaver somniferum
QL08p056843 Quercus lobata
RcHm_v2.0_Chr1g0364121 Rosa chinensis
Sabra08G0030600 Salix brachista
SalBow1G5334 Salvia bowleyana
SalBow1G7067 Salvia bowleyana
SalBow3G2244 Salvia bowleyana
SalBow3G3619 Salvia bowleyana
Sc05g0001890 Simmondsia chinensis
Sed0018161 Sechium edule
SEGI_41538 Sequoiadendron giganteum
SGA_v2.0_scaffold71G24037 Striga asiatica
SMO207G0003 Selaginella moellendorffii
Solyc04g049970.4 Solanum lycopersicum
Solyc07g065720.4 Solanum lycopersicum
Sopen04g020610 Solanum pennellii
Sopen07g033930 Solanum pennellii
Sp6g14210 Schrenkiella parvula
TAR381G1573 Trochodendron aralioides
THA.LOC104799357 Tarenaya hassleriana
Thecc.10G068000 Theobroma cacao
Thhalv10015092m.g Eutrema salsugineum
TPR.G12499 Trifolium pratense
TPR.G31353 Trifolium pratense
TWI15G0398 Tripterygium wilfordii
TWI38G1562 Tripterygium wilfordii
unitig_8.g3685 Utricularia gibba
vmacro04890 Vaccinium macrocarpon
Zm00001eb163500 Zea mays
Zm00001eb235420 Zea mays

User provided reference genes

Program Settings