Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p10720 Brassica napus
Aa31LG9G16220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis
Ah.01g016960 Amaranthus hybridus
AL4G30990 Arabidopsis lyrata
Aqoxy2G00957 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea
AT2G34980 Arabidopsis thaliana
ATR0618G331 Amborella trichopoda
Atru.chr10.357 Acer truncatum
Atru.chr10.361 Acer truncatum
AUR62023912 Chenopodium quinoa
AUR62038334 Chenopodium quinoa
BcaB02g09491 Brassica carinata
BcaB02g09492 Brassica carinata
BcaB06g28814 Brassica carinata
BcaC02g11579 Brassica carinata
BolC4t22971H Brassica oleracea
BraA05t20016Z Brassica rapa
C04p13810 Brassica napus
CAN.G809.72 Capsicum annuum
CARHR129140 Cardamine hirsuta
CARHR278340 Cardamine hirsuta
Carub.0004s1667 Capsella rubella
Ca_04011_v3 Cicer arietinum L.
CBR_g21245 Chara braunii
Cc09_g05360 Coffea canephora
Cfa001129 Carpinus fangiana
Cfa024382 Carpinus fangiana
Ciclev10016094m.g Citrus clementina
CiPaw.09G178700 Carya illinoinensis
CiPaw.09G178800 Carya illinoinensis
ClCG01G008540 Citrullus lanatus
ClCG01G009960 Citrullus lanatus
COL.COLO4_15977 Corchorus olitorius
Cpa.g.sc17.6 Carica papaya
Cre02.g109850 Chlamydomonas reinhardtii
CSS0030019 Camellia sinensis var. sinensis
CSS0033773 Camellia sinensis var. sinensis
DCAR_002228 Daucus carota
Dinv31187 Davidia involucrata
Duzib151G1210 Durio zibethinus
ECA238G2846 Erigeron canadensis
EL10Ac9g21106 Beta vulgaris
Eucgr.G02638 Eucalyptus grandis
FAN15G0194 Fragaria x ananassa
FAN19G0110 Fragaria x ananassa
FAN24G3472 Fragaria x ananassa
FAN26G0490 Fragaria x ananassa
FAN27G3249 Fragaria x ananassa
FAN28G1898 Fragaria x ananassa
FvH4_1g22930 Fragaria vesca
FvH4_2g14913 Fragaria vesca
Glyma.12G019600 Glycine max
Gohir.A09G227000 Gossypium hirsutum
Gohir.D09G228000 Gossypium hirsutum
Gorai.006G250700 Gossypium raimondii
GSVIVG01012143001 Vitis vinifera
HanXRQChr04g0115041 Helianthus annuus
Haze_05263 Corylus avellana
HPP92_025694 Vanilla planifolia
Hund00745 Selenicereus undatus
Lalb_Chr17g0344101 Lupinus albus
Lj2P343T23 Lonicera japonica
Lj3g0027197 Lotus japonicus
Lsat_1_v5_gn_2_60361 Lactuca sativa
Lsat_1_v5_gn_5_184141 Lactuca sativa
Manes.16G050000 Manihot esculenta
Mapoly0096s0067 Marchantia polymorpha
MCO15G034 Micromonas commoda
MD05G1011700 Malus domestica
MD12G1011000 Malus domestica
Medtr3g077990 Medicago truncatula
MELO3C021702.2 Cucumis melo
Migut.H00867 Erythranthe guttata
MSTRG.26599 Avicennia marina
Nitab4.5_0006933g0010 Nicotiana tabacum
Nitab4.5_0006976g0040 Nicotiana tabacum
Nitab4.5_0011913g0010 Nicotiana tabacum
Nn2g13637 Nelumbo nucifera
Nn2g13638 Nelumbo nucifera
Oeu063995.1 Olea europaea
Os02g0622200 Oryza sativa ssp. japonica
Peaxi162Scf00048g00146 Petunia axillaris
PGR142G3917 Punica granatum
PGSC0003DMG400017743 Solanum tuberosum
PGSC0003DMG400024410 Solanum tuberosum
Phvul.011G021750 Phaseolus vulgaris
Phvul.011G022000 Phaseolus vulgaris
Potri.001G160600 Populus trichocarpa
Potri.003G074300 Populus trichocarpa
Pp3c1_31960 Physcomitrium patens
Prupe.7G012900 Prunus persica
Prupe.8G016600 Prunus persica
Psat4g130000 Pisum sativum
Psat4g130160 Pisum sativum
Psat7g123440 Pisum sativum
PSO339G5576 Papaver somniferum
PSO801G0209 Papaver somniferum
QL03p068630 Quercus lobata
QL05p030092 Quercus lobata
QL06p000087 Quercus lobata
RcHm_v2.0_Chr3g0496061 Rosa chinensis
RcHm_v2.0_Chr6g0277521 Rosa chinensis
Rhsim02G0117500 Rhododendron simsii
Rhsim08G0028000 Rhododendron simsii
Sabra03G0045000 Salix brachista
SalBow5G0150 Salvia bowleyana
Sc15g0000060 Simmondsia chinensis
Sed0006244 Sechium edule
SEGI_06024 Sequoiadendron giganteum
SEGI_24883 Sequoiadendron giganteum
SGA_v2.0_scaffold184G40027 Striga asiatica
SHI47983 Sapria himalayana
SHI51133 Sapria himalayana
SMO174G0201 Selaginella moellendorffii
Solyc02g081610.3 Solanum lycopersicum
Sopen02g026230 Solanum pennellii
Sp2g07050 Schrenkiella parvula
TAR633G0926 Trochodendron aralioides
TAR636G0743 Trochodendron aralioides
TAR636G1551 Trochodendron aralioides
THA.LOC104798565 Tarenaya hassleriana
Thecc.04G266000 Theobroma cacao
Thhalv10016993m.g Eutrema salsugineum
TPR.G21775 Trifolium pratense
TPR.G24478 Trifolium pratense
TPR.G29739 Trifolium pratense
TWI53G2110 Tripterygium wilfordii
TWI74G1242 Tripterygium wilfordii
unitig_747.g21312 Utricularia gibba
vmacro03555 Vaccinium macrocarpon
VMungo1127G0046 Vigna mungo
Zm00001eb185080 Zea mays

User provided reference genes

Program Settings