Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18150 Brassica napus
A03p57000 Brassica napus
Aa31LG5G10420 Aethionema arabicum
Actinidia10731 Actinidia chinensis
Actinidia35339 Actinidia chinensis
Ah.06g186160 Amaranthus hybridus
AL7G25840 Arabidopsis lyrata
AL8G30390 Arabidopsis lyrata
Aqoxy4G01822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2B36BL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F03U7D Arachis hypogaea
AT4G26990 Arabidopsis thaliana
AT5G54920 Arabidopsis thaliana
ATR0752G139 Amborella trichopoda
Atru.chr2.3344 Acer truncatum
AUR62015759 Chenopodium quinoa
AUR62020456 Chenopodium quinoa
BcaC06g32718 Brassica carinata
BcaNung03572 Brassica carinata
BcaNung03574 Brassica carinata
BolC1t02245H Brassica oleracea
BraA01t01770Z Brassica rapa
C01p23110 Brassica napus
C07p55070 Brassica napus
CAN.G337.126 Capsicum annuum
CANSAT78G0206 Cannabis sativa
CARHR234600 Cardamine hirsuta
CARHR234610 Cardamine hirsuta
CARHR268260 Cardamine hirsuta
Carub.0007s1385 Capsella rubella
Carub.0008s1522 Capsella rubella
Ca_14723_v3 Cicer arietinum L.
Cc05_g13740 Coffea canephora
CDE02G1816 Ceratophyllum demersum
Cfa020355 Carpinus fangiana
Ciclev10007877m.g Citrus clementina
CiPaw.11G188500 Carya illinoinensis
CiPaw.11G188600 Carya illinoinensis
ClCG10G005460 Citrullus lanatus
COL.COLO4_09655 Corchorus olitorius
Cpa.g.sc97.11 Carica papaya
CsaV3_3G005190 Cucumis sativus L.
CSS0005908 Camellia sinensis var. sinensis
CSS0013660 Camellia sinensis var. sinensis
CSS0015985 Camellia sinensis var. sinensis
CSS0029311 Camellia sinensis var. sinensis
CSS0033352 Camellia sinensis var. sinensis
CSS0040669 Camellia sinensis var. sinensis
CSS0046301 Camellia sinensis var. sinensis
CSS0048434 Camellia sinensis var. sinensis
DCAR_022557 Daucus carota
Dinv22267 Davidia involucrata
Dinv40749 Davidia involucrata
Duzib170G0684 Durio zibethinus
Duzib213G1063 Durio zibethinus
ECA236G0832 Erigeron canadensis
EL10Ac4g07817 Beta vulgaris
Eucgr.F00770 Eucalyptus grandis
FAN11G3996 Fragaria x ananassa
FAN16G1141 Fragaria x ananassa
FAN21G2493 Fragaria x ananassa
FAN25G0533 Fragaria x ananassa
FvH4_3g22540 Fragaria vesca
Glyma.08G315100 Glycine max
Glyma.18G099000 Glycine max
Gohir.A04G008750 Gossypium hirsutum
Gohir.A04G017100 Gossypium hirsutum
Gohir.D05G369100 Gossypium hirsutum
Gorai.009G437800 Gossypium raimondii
GSVIVG01037637001 Vitis vinifera
HanXRQChr15g0494351 Helianthus annuus
HanXRQChr16g0515041 Helianthus annuus
Haze_09667 Corylus avellana
HPP92_016531 Vanilla planifolia
Hund02053 Selenicereus undatus
Lalb_Chr15g0081011 Lupinus albus
Lj1A871G90 Lonicera japonica
Lj6g0004879 Lotus japonicus
Lsat_1_v5_gn_7_108641 Lactuca sativa
Manes.03G128700 Manihot esculenta
Manes.15G072600 Manihot esculenta
MBI02_g22112_MAGBIO Magnolia biondii
MD03G1202100 Malus domestica
Medtr3g051270 Medicago truncatula
MELO3C025386.2 Cucumis melo
Migut.M01771 Erythranthe guttata
MSTRG.15152 Avicennia marina
Nitab4.5_0001913g0030 Nicotiana tabacum
Nitab4.5_0003812g0080 Nicotiana tabacum
Nn1g03551 Nelumbo nucifera
Oeu004755.1 Olea europaea
Oeu007583.4 Olea europaea
Oeu042934.1 Olea europaea
Oeu062590.1 Olea europaea
Os04g0625900 Oryza sativa ssp. japonica
Peaxi162Scf00964g00029 Petunia axillaris
PGR083G0792 Punica granatum
PGSC0003DMG400022322 Solanum tuberosum
Phvul.006G042100 Phaseolus vulgaris
Potri.001G423200 Populus trichocarpa
Potri.011G138600 Populus trichocarpa
Prupe.4G211900 Prunus persica
Psat0s6641g0040 Pisum sativum
Psat1g117840 Pisum sativum
Psat1g183360 Pisum sativum
Psat5g180520 Pisum sativum
Psat5g186680 Pisum sativum
PSO210G3457 Papaver somniferum
PSO832G3698 Papaver somniferum
QL08p010535 Quercus lobata
RcHm_v2.0_Chr5g0039281 Rosa chinensis
RcHm_v2.0_Chr6g0266511 Rosa chinensis
RhsimUnG0251100 Rhododendron simsii
Sabra11G0124200 Salix brachista
Sabra16G0289400 Salix brachista
Sc07g0002780 Simmondsia chinensis
Sed0020363 Sechium edule
SGA_v2.0_scaffold74G24678 Striga asiatica
SHI26621 Sapria himalayana
Solyc07g064550.3 Solanum lycopersicum
Sopen07g032730 Solanum pennellii
Sp7g24940 Schrenkiella parvula
TAR629G3535 Trochodendron aralioides
THA.LOC104818102 Tarenaya hassleriana
Thecc.07G038900 Theobroma cacao
Thhalv10015348m.g Eutrema salsugineum
Thhalv10025144m.g Eutrema salsugineum
TPR.G16572 Trifolium pratense
TWI38G0917 Tripterygium wilfordii
TWI38G1056 Tripterygium wilfordii
unitig_8.g4619 Utricularia gibba
vmacro09719 Vaccinium macrocarpon
VMungo0723G0001 Vigna mungo
Zm00001eb070120 Zea mays
Zm00001eb431320 Zea mays

User provided reference genes

Program Settings