Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p29840 Brassica napus
A07p39320 Brassica napus
Aa31LG4G3620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis
Actinidia06837 Actinidia chinensis
Ah.14g085830 Amaranthus hybridus
AL2G33120 Arabidopsis lyrata
AL2G33130 Arabidopsis lyrata
Aqoxy3G04339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea
AT1G73350 Arabidopsis thaliana
ATR0124G026 Amborella trichopoda
Atru.chr9.27 Acer truncatum
AUR62040639 Chenopodium quinoa
AUR62041602 Chenopodium quinoa
BcaB03g15052 Brassica carinata
BcaB03g15707 Brassica carinata
BcaC08g45648 Brassica carinata
BcaC08g45649 Brassica carinata
BcaC08g46759 Brassica carinata
BolC6t38521H Brassica oleracea
BolC6t39793H Brassica oleracea
BraA07t30622Z Brassica rapa
BraA07t31481Z Brassica rapa
C06p34060 Brassica napus
C06p47550 Brassica napus
CAN.G65.61 Capsicum annuum
CAN.G861.19 Capsicum annuum
CANSAT80G0630 Cannabis sativa
CARHR066400 Cardamine hirsuta
Carub.0002s2009 Capsella rubella
Ca_25284_v3 Cicer arietinum L.
CBR_g54189 Chara braunii
Cc00_g01560 Coffea canephora
Cc00_g01570 Coffea canephora
CDE04G3305 Ceratophyllum demersum
CDE04G3451 Ceratophyllum demersum
CDE08G1652 Ceratophyllum demersum
Cfa017810 Carpinus fangiana
Ciclev10024397m.g Citrus clementina
CiPaw.15G108100 Carya illinoinensis
ClCG04G012440 Citrullus lanatus
COL.COLO4_38544 Corchorus olitorius
Cpa.g.sc628.6 Carica papaya
CsaV3_1G005260 Cucumis sativus L.
CsaV3_1G005270 Cucumis sativus L.
CSS0040154 Camellia sinensis var. sinensis
DCAR_023237 Daucus carota
Dinv04371 Davidia involucrata
Duzib205G1872 Durio zibethinus
ECA232G1540 Erigeron canadensis
EL10Ac8g19469 Beta vulgaris
Eucgr.G00948 Eucalyptus grandis
Eucgr.H00664 Eucalyptus grandis
Eucgr.J01173 Eucalyptus grandis
FAN08G2690 Fragaria x ananassa
FAN13G1309 Fragaria x ananassa
FAN18G3658 Fragaria x ananassa
FvH4_5g27080 Fragaria vesca
Glyma.09G161000 Glycine max
Glyma.16G210400 Glycine max
Gohir.A07G062900 Gossypium hirsutum
Gohir.D07G067500 Gossypium hirsutum
Gorai.001G071100 Gossypium raimondii
GSVIVG01024240001 Vitis vinifera
GSVIVG01024241001 Vitis vinifera
HanXRQChr04g0126291 Helianthus annuus
HanXRQChr04g0126301 Helianthus annuus
HPP92_021122 Vanilla planifolia
Hund06741 Selenicereus undatus
Lalb_Chr14g0370131 Lupinus albus
Lalb_Chr14g0370141 Lupinus albus
Lalb_Chr24g0398631 Lupinus albus
Lj2g0008613 Lotus japonicus
Lj5C168T8 Lonicera japonica
Lsat_1_v5_gn_6_23301 Lactuca sativa
Manes.15G187700 Manihot esculenta
Mapoly0033s0045 Marchantia polymorpha
MBI03_g11902_MAGBIO Magnolia biondii
MD06G1000100 Malus domestica
Medtr6g068990 Medicago truncatula
MELO3C001966.2 Cucumis melo
Migut.O00287 Erythranthe guttata
MSTRG.23218 Avicennia marina
Nitab4.5_0000477g0100 Nicotiana tabacum
Nitab4.5_0005315g0030 Nicotiana tabacum
Nitab4.5_0008182g0060 Nicotiana tabacum
Nitab4.5_0009307g0030 Nicotiana tabacum
Nn4g25057 Nelumbo nucifera
Oeu038392.3 Olea europaea
Os02g0637900 Oryza sativa ssp. japonica
Peaxi162Scf00171g00037 Petunia axillaris
PGR083G1308 Punica granatum
PGSC0003DMG400015277 Solanum tuberosum
PGSC0003DMG400026968 Solanum tuberosum
PGSC0003DMG400035697 Solanum tuberosum
Phvul.004G136400 Phaseolus vulgaris
Potri.004G066700 Populus trichocarpa
Pp3c16_8600 Physcomitrium patens
Pp3c25_5680 Physcomitrium patens
Prupe.1G588300 Prunus persica
Psat1g118960 Pisum sativum
PSO063G6484 Papaver somniferum
PSO782G4127 Papaver somniferum
QL10p031508 Quercus lobata
QL10p035764 Quercus lobata
QL12p037498 Quercus lobata
RcHm_v2.0_Chr7g0218081 Rosa chinensis
Rhsim08G0128600 Rhododendron simsii
Sabra04G0044500 Salix brachista
SalBow5G5648 Salvia bowleyana
Sc10g0008680 Simmondsia chinensis
Sed0024837 Sechium edule
SEGI_37918 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09651 Striga asiatica
SGA_v2.0_scaffold25G10718 Striga asiatica
SHI05872 Sapria himalayana
SMO232G0035 Selaginella moellendorffii
Solyc03g019860.3 Solanum lycopersicum
Solyc06g150131.1 Solanum lycopersicum
Sopen03g029760 Solanum pennellii
Sopen06g028430 Solanum pennellii
Sp5g28280 Schrenkiella parvula
TAR472G0004 Trochodendron aralioides
TAR636G2449 Trochodendron aralioides
THA.LOC104812187 Tarenaya hassleriana
Thecc.03G073300 Theobroma cacao
Thhalv10019162m.g Eutrema salsugineum
TWI81G0144 Tripterygium wilfordii
vmacro17760 Vaccinium macrocarpon
vmacro17761 Vaccinium macrocarpon
vmacro17785 Vaccinium macrocarpon
VMungo0464G0712 Vigna mungo
Zm00001eb185640 Zea mays

User provided reference genes

Program Settings