Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13000 Brassica napus
A10p14370 Brassica napus
Aa31LG3G12940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5761 Anthoceros agrestis
Actinidia39706 Actinidia chinensis
Ah.09g227980 Amaranthus hybridus
AL8G32950 Arabidopsis lyrata
Aqoxy7G04004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9N5J50 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZDQ9N1 Arachis hypogaea
AT5G57040 Arabidopsis thaliana
ATR1153G002 Amborella trichopoda
Atru.chr7.1637 Acer truncatum
AUR62009007 Chenopodium quinoa
AUR62023295 Chenopodium quinoa
AUR62029026 Chenopodium quinoa
AUR62044275 Chenopodium quinoa
BcaB01g04441 Brassica carinata
BcaB08g36014 Brassica carinata
BcaC01g06463 Brassica carinata
BcaC04g20019 Brassica carinata
BcaNung07292 Brassica carinata
BolC3t13958H Brassica oleracea
BolC9t57719H Brassica oleracea
BraA03t10610Z Brassica rapa
BraA10t43528Z Brassica rapa
C03p15170 Brassica napus
C09p48710 Brassica napus
CAN.G235.10 Capsicum annuum
CANSAT56G3008 Cannabis sativa
CARHR270800 Cardamine hirsuta
Carub.0008s1755 Capsella rubella
Ca_21296_v3 Cicer arietinum L.
CBR_g3298 Chara braunii
Cc06_g11700 Coffea canephora
CDE02G0045 Ceratophyllum demersum
CDE04G1502 Ceratophyllum demersum
CDE04G2916 Ceratophyllum demersum
Cfa003053 Carpinus fangiana
Ciclev10009538m.g Citrus clementina
CiPaw.03G211900 Carya illinoinensis
ClCG03G015400 Citrullus lanatus
COL.COLO4_18163 Corchorus olitorius
Cpa.g.sc28.129 Carica papaya
Cre10.g466500 Chlamydomonas reinhardtii
CsaV3_1G040650 Cucumis sativus L.
CSS0015550 Camellia sinensis var. sinensis
DCAR_028277 Daucus carota
Dinv36789 Davidia involucrata
Duzib150G0581 Durio zibethinus
Duzib168G1813 Durio zibethinus
ECA234G1336 Erigeron canadensis
EL10Ac8g19167 Beta vulgaris
Eucgr.C03409 Eucalyptus grandis
FAN19G0250 Fragaria x ananassa
FAN23G0534 Fragaria x ananassa
FAN26G0267 Fragaria x ananassa
FAN26G0888 Fragaria x ananassa
FAN28G0463 Fragaria x ananassa
FvH4_1g07980 Fragaria vesca
Glyma.13G106600 Glycine max
Glyma.17G052700 Glycine max
Gohir.A03G138566 Gossypium hirsutum
Gohir.A04G044500 Gossypium hirsutum
Gohir.A06G073900 Gossypium hirsutum
Gohir.A06G109800 Gossypium hirsutum
Gohir.A07G143100 Gossypium hirsutum
Gohir.A09G068100 Gossypium hirsutum
Gohir.D06G072800 Gossypium hirsutum
Gorai.010G084800 Gossypium raimondii
GSVIVG01015161001 Vitis vinifera
HanXRQChr09g0262851 Helianthus annuus
HanXRQChr12g0354491 Helianthus annuus
Haze_25944 Corylus avellana
Hma1.2p1_0169F.1_g074820 Hydrangea macrophylla
Hma1.2p1_0169F.1_g074830 Hydrangea macrophylla
HPP92_020002 Vanilla planifolia
Hund08697 Selenicereus undatus
Lalb_Chr12g0199911 Lupinus albus
Lj4g0012446 Lotus japonicus
Lsat_1_v5_gn_5_143221 Lactuca sativa
Manes.16G099500 Manihot esculenta
Mapoly0070s0082 Marchantia polymorpha
Mapoly0078s0028 Marchantia polymorpha
Mapoly0083s0052 Marchantia polymorpha
MBI05_g15475_MAGBIO Magnolia biondii
MCO05G344 Micromonas commoda
MD02G1084200 Malus domestica
MD15G1211500 Malus domestica
Medtr4g125860 Medicago truncatula
MELO3C015494.2 Cucumis melo
Migut.J00571 Erythranthe guttata
MSTRG.19491 Avicennia marina
Nitab4.5_0001519g0150 Nicotiana tabacum
Nitab4.5_0006861g0030 Nicotiana tabacum
Nn6g35546 Nelumbo nucifera
Oeu051302.1 Olea europaea
Os07g0160400 Oryza sativa ssp. japonica
Peaxi162Scf00494g00510 Petunia axillaris
PGR102G3219 Punica granatum
PGSC0003DMG400010712 Solanum tuberosum
Phvul.003G134400 Phaseolus vulgaris
Potri.018G056200 Populus trichocarpa
Pp3c3_33270 Physcomitrium patens
Pp3c4_10740 Physcomitrium patens
PRCOL_00003968 Prasinoderma coloniale
Prupe.7G205300 Prunus persica
Psat0s1725g0120 Pisum sativum
PSO210G0920 Papaver somniferum
PSO210G7392 Papaver somniferum
QL02p061913 Quercus lobata
RcHm_v2.0_Chr2g0093891 Rosa chinensis
RcHm_v2.0_Chr2g0094011 Rosa chinensis
Rhsim05G0015000 Rhododendron simsii
Sabra06G0116100 Salix brachista
SalBow6G2198 Salvia bowleyana
Sc18g0002310 Simmondsia chinensis
Sed0022874 Sechium edule
SEGI_26166 Sequoiadendron giganteum
SGA_v2.0_scaffold91G28064 Striga asiatica
SMO356G0241 Selaginella moellendorffii
Solyc07g040950.3 Solanum lycopersicum
Sopen07g020020 Solanum pennellii
Sp6g18760 Schrenkiella parvula
TAR624G1021 Trochodendron aralioides
THA.LOC104811753 Tarenaya hassleriana
Thecc.09G083800 Theobroma cacao
Thhalv10014727m.g Eutrema salsugineum
TPR.G20403 Trifolium pratense
TWI34G0035 Tripterygium wilfordii
unitig_0.g2267 Utricularia gibba
vmacro17149 Vaccinium macrocarpon
VMungo1215G1838 Vigna mungo
VMungo1215G3373 Vigna mungo
Zm00001eb032820 Zea mays

User provided reference genes

Program Settings