Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G2310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis
Actinidia08777 Actinidia chinensis
Actinidia28901 Actinidia chinensis
Ah.05g172440 Amaranthus hybridus
AL6G12680 Arabidopsis lyrata
Aqoxy1G01163 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea
AT5G03345 Arabidopsis thaliana
ATR0104G002 Amborella trichopoda
Atru.chr8.1820 Acer truncatum
AUR62004704 Chenopodium quinoa
AUR62023620 Chenopodium quinoa
BcaC03g13014 Brassica carinata
CAN.G900.40 Capsicum annuum
CANSAT80G0760 Cannabis sativa
CARHR210000 Cardamine hirsuta
Carub.0006s0216 Capsella rubella
Ca_11494_v3 Cicer arietinum L.
Cc06_g04180 Coffea canephora
CDE06G0870 Ceratophyllum demersum
Cfa020071 Carpinus fangiana
Ciclev10013173m.g Citrus clementina
CiPaw.09G219400 Carya illinoinensis
ClCG10G020160 Citrullus lanatus
ClCG10G020180 Citrullus lanatus
COL.COLO4_26972 Corchorus olitorius
Cre03.g183050 Chlamydomonas reinhardtii
CsaV3_3G035950 Cucumis sativus L.
CSS0022084 Camellia sinensis var. sinensis
CSS0033637 Camellia sinensis var. sinensis
CSS0033757 Camellia sinensis var. sinensis
CSS0041044 Camellia sinensis var. sinensis
CSS0043170 Camellia sinensis var. sinensis
DCAR_020822 Daucus carota
Dinv35784 Davidia involucrata
Dinv37311 Davidia involucrata
Duzib093G2107 Durio zibethinus
Duzib128G1360 Durio zibethinus
ECA233G4120 Erigeron canadensis
EL10Ac1g00026 Beta vulgaris
Eucgr.A01688 Eucalyptus grandis
FAN02G1695 Fragaria x ananassa
FAN05G2010 Fragaria x ananassa
FAN09G1333 Fragaria x ananassa
FAN14G5754 Fragaria x ananassa
FvH4_6g16280 Fragaria vesca
Glyma.03G182900 Glycine max
Glyma.10G057000 Glycine max
Glyma.13G143500 Glycine max
Glyma.19G183500 Glycine max
Gohir.A09G147500 Gossypium hirsutum
Gohir.D09G143100 Gossypium hirsutum
Gorai.006G061900 Gossypium raimondii
Gorai.006G164600 Gossypium raimondii
GSVIVG01025728001 Vitis vinifera
HanXRQChr02g0051611 Helianthus annuus
HanXRQChr13g0401071 Helianthus annuus
Haze_20124 Corylus avellana
Haze_20552 Corylus avellana
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla
HPP92_009808 Vanilla planifolia
Hund20347 Selenicereus undatus
Lalb_Chr02g0155891 Lupinus albus
Lalb_Chr02g0156001 Lupinus albus
Lalb_Chr20g0112621 Lupinus albus
Lalb_Chr25g0289001 Lupinus albus
Lj2A1109T71 Lonicera japonica
Lj5g0010104 Lotus japonicus
Lsat_1_v5_gn_6_25181 Lactuca sativa
Manes.08G009800 Manihot esculenta
Manes.09G066900 Manihot esculenta
Mapoly0011s0153 Marchantia polymorpha
MCO03G507 Micromonas commoda
MD04G1094200 Malus domestica
MD12G1113800 Malus domestica
Medtr1g063370 Medicago truncatula
Medtr7g101880 Medicago truncatula
MELO3C009353.2 Cucumis melo
Migut.L01698 Erythranthe guttata
MSTRG.19175 Avicennia marina
Nitab4.5_0000578g0140 Nicotiana tabacum
Nitab4.5_0002632g0020 Nicotiana tabacum
Nn7g38309 Nelumbo nucifera
Oeu045224.1 Olea europaea
Oeu053677.1 Olea europaea
Os11g0568633 Oryza sativa ssp. japonica
Os12g0566400 Oryza sativa ssp. japonica
Peaxi162Scf00701g00029 Petunia axillaris
PGR004G0006 Punica granatum
PGSC0003DMG400003860 Solanum tuberosum
Phvul.001G178800 Phaseolus vulgaris
Phvul.007G149300 Phaseolus vulgaris
Potri.006G125300 Populus trichocarpa
Potri.016G091900 Populus trichocarpa
Pp3c5_16080 Physcomitrium patens
Pp3c6_8930 Physcomitrium patens
Prupe.6G232700 Prunus persica
Psat0s2933g0080 Pisum sativum
Psat6g073040 Pisum sativum
PSO063G6473 Papaver somniferum
PSO339G2391 Papaver somniferum
QL07p043606 Quercus lobata
RcHm_v2.0_Chr3g0470141 Rosa chinensis
Rhsim03G0092400 Rhododendron simsii
Sabra16G0097500 Salix brachista
SalBow5G0179 Salvia bowleyana
SalBow5G1412 Salvia bowleyana
Sc02g0001670 Simmondsia chinensis
Sed0003931 Sechium edule
Sed0019850 Sechium edule
SEGI_15519 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24844 Striga asiatica
SMO137G0056 Selaginella moellendorffii
Solyc09g008140.3 Solanum lycopersicum
Sopen09g002940 Solanum pennellii
Sp6g39390 Schrenkiella parvula
TAR369G0407 Trochodendron aralioides
TAR633G0139 Trochodendron aralioides
THA.LOC104826911 Tarenaya hassleriana
Thecc.05G065200 Theobroma cacao
Thhalv10015093m.g Eutrema salsugineum
TPR.G25697 Trifolium pratense
TPR.G9369 Trifolium pratense
TWI74G1168 Tripterygium wilfordii
TWI77G0618 Tripterygium wilfordii
unitig_578.g16384 Utricularia gibba
vmacro07288 Vaccinium macrocarpon
VMungo1383G0680 Vigna mungo
Zm00001eb028740 Zea mays
Zm00001eb136890 Zea mays

User provided reference genes

Program Settings