Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p55610 Brassica napus
Aa31LG7G10960 Aethionema arabicum
Aa31LG7G10970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis
Actinidia25578 Actinidia chinensis
Actinidia28259 Actinidia chinensis
Actinidia33099 Actinidia chinensis
Ah.02g114920 Amaranthus hybridus
AL7G28320 Arabidopsis lyrata
Aqoxy3G01542 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea
AT4G24880 Arabidopsis thaliana
ATR0561G060 Amborella trichopoda
Atru.chr9.1122 Acer truncatum
AUR62025939 Chenopodium quinoa
AUR62029618 Chenopodium quinoa
BcaC06g32852 Brassica carinata
BolC7t45875H Brassica oleracea
BraA03t14628Z Brassica rapa
C07p53850 Brassica napus
CAN.G567.98 Capsicum annuum
CANSAT80G0573 Cannabis sativa
CARHR232280 Cardamine hirsuta
Carub.0007s1619 Capsella rubella
Ca_24503_v3 Cicer arietinum L.
Cc08_g16880 Coffea canephora
CDE05G2332 Ceratophyllum demersum
CDE05G3540 Ceratophyllum demersum
CDE12G0192 Ceratophyllum demersum
Cfa018827 Carpinus fangiana
Ciclev10020324m.g Citrus clementina
CiPaw.11G008100 Carya illinoinensis
ClCG06G017860 Citrullus lanatus
COL.COLO4_28103 Corchorus olitorius
COL.COLO4_31215 Corchorus olitorius
Cpa.g.sc2981.2 Carica papaya
Cre16.g666000 Chlamydomonas reinhardtii
CsaV3_1G000590 Cucumis sativus L.
CSS0041302 Camellia sinensis var. sinensis
DCAR_021616 Daucus carota
DCAR_032199 Daucus carota
Dinv11169 Davidia involucrata
Duzib205G1133 Durio zibethinus
ECA232G3603 Erigeron canadensis
EL10As4g23384 Beta vulgaris
Eucgr.K02730 Eucalyptus grandis
Eucgr.L02977 Eucalyptus grandis
FAN07G2643 Fragaria x ananassa
FAN08G2910 Fragaria x ananassa
FAN12G3536 Fragaria x ananassa
FAN12G3591 Fragaria x ananassa
FAN13G0489 Fragaria x ananassa
FAN18G3767 Fragaria x ananassa
FvH4_4g11820 Fragaria vesca
FvH4_5g08230 Fragaria vesca
Glyma.04G195500 Glycine max
Glyma.06G170500 Glycine max
Gohir.A12G189400 Gossypium hirsutum
Gohir.D12G191700 Gossypium hirsutum
Gorai.008G206000 Gossypium raimondii
GSVIVG01008538001 Vitis vinifera
GSVIVG01008540001 Vitis vinifera
HanXRQChr10g0289761 Helianthus annuus
HanXRQChr10g0289791 Helianthus annuus
HanXRQChr16g0498211 Helianthus annuus
Haze_07221 Corylus avellana
HPP92_020223 Vanilla planifolia
Lalb_Chr08g0237111 Lupinus albus
Lj1g0015277 Lotus japonicus
Lj9A478G92 Lonicera japonica
Lsat_1_v5_gn_4_80081 Lactuca sativa
Lsat_1_v5_gn_8_150141 Lactuca sativa
Lsat_1_v5_gn_8_77640 Lactuca sativa
Manes.14G051500 Manihot esculenta
Mapoly0024s0037 Marchantia polymorpha
MBI07_g31012_MAGBIO Magnolia biondii
MCO07G390 Micromonas commoda
MD14G1157700 Malus domestica
Medtr3g074980 Medicago truncatula
MELO3C026209.2 Cucumis melo
Migut.E00304 Erythranthe guttata
MSTRG.13706 Avicennia marina
Nitab4.5_0000479g0030 Nicotiana tabacum
Nitab4.5_0002720g0090 Nicotiana tabacum
Nn3g16475 Nelumbo nucifera
Oeu010732.1 Olea europaea
Os01g0101300 Oryza sativa ssp. japonica
Peaxi162Scf00074g00136 Petunia axillaris
PGR044G2189 Punica granatum
PGSC0003DMG400012114 Solanum tuberosum
Phvul.009G166600 Phaseolus vulgaris
Potri.015G095400 Populus trichocarpa
Pp3c8_11540 Physcomitrium patens
PRCOL_00001155 Prasinoderma coloniale
Prupe.5G151700 Prunus persica
Psat5g140680 Pisum sativum
PSO339G3552 Papaver somniferum
PSO478G2520 Papaver somniferum
PSO782G2798 Papaver somniferum
PSO801G0019 Papaver somniferum
QL10p003203 Quercus lobata
QL10p003231 Quercus lobata
RcHm_v2.0_Chr4g0407901 Rosa chinensis
RcHm_v2.0_Chr4g0407951 Rosa chinensis
RcHm_v2.0_Chr4g0409241 Rosa chinensis
RcHm_v2.0_Chr7g0190291 Rosa chinensis
Rhsim08G0189700 Rhododendron simsii
RhsimUnG0231400 Rhododendron simsii
Sabra15G0116400 Salix brachista
SalBow5G0293 Salvia bowleyana
SalBow5G5674 Salvia bowleyana
Sc04g0000680 Simmondsia chinensis
Sed0005313 Sechium edule
SEGI_05259 Sequoiadendron giganteum
SEGI_17145 Sequoiadendron giganteum
SEGI_21905 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09828 Striga asiatica
SHI06365 Sapria himalayana
SMO364G0648 Selaginella moellendorffii
Solyc08g083260.3 Solanum lycopersicum
Sopen08g031450 Solanum pennellii
Sp7g22860 Schrenkiella parvula
TAR629G1577 Trochodendron aralioides
TAR629G2476 Trochodendron aralioides
TAR633G0019 Trochodendron aralioides
THA.LOC104825016 Tarenaya hassleriana
Thecc.03G128600 Theobroma cacao
Thhalv10025348m.g Eutrema salsugineum
TPR.G12158 Trifolium pratense
TPR.G26152 Trifolium pratense
unitig_27.g25288 Utricularia gibba
vmacro19203 Vaccinium macrocarpon
VMungo1309G1043 Vigna mungo
Zm00001eb354570 Zea mays

User provided reference genes

Program Settings