Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G17240 Aethionema arabicum
Actinidia06790 Actinidia chinensis
Actinidia13362 Actinidia chinensis
Actinidia15607 Actinidia chinensis
Actinidia18454 Actinidia chinensis
Actinidia40376 Actinidia chinensis
Ah.04g157100 Amaranthus hybridus
AL3G17770 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.X5UH65 Arachis hypogaea
AT3G36659 Arabidopsis thaliana
ATR0796G103 Amborella trichopoda
ATR0796G165 Amborella trichopoda
Atru.chr4.3013 Acer truncatum
BcaC05g30549 Brassica carinata
BcaC09g47911 Brassica carinata
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus
BolC1t05594H Brassica oleracea
BraA01t04423Z Brassica rapa
CAN.G244.7 Capsicum annuum
CANSAT25G2213 Cannabis sativa
CANSAT78G0521 Cannabis sativa
CARHR081260 Cardamine hirsuta
Carub.0003s0617 Capsella rubella
Carub.0003s0619 Capsella rubella
Ca_01851_v3 Cicer arietinum L.
Cc03_g00920 Coffea canephora
CDE02G2547 Ceratophyllum demersum
CDE06G2294 Ceratophyllum demersum
CDE07G0112 Ceratophyllum demersum
Cfa015324 Carpinus fangiana
Ciclev10007183m.g Citrus clementina
CiPaw.02G075500 Carya illinoinensis
ClCG10G011490 Citrullus lanatus
COL.COLO4_34630 Corchorus olitorius
Cpa.g.sc9.68 Carica papaya
CsaV3_4G001290 Cucumis sativus L.
CSS0018184 Camellia sinensis var. sinensis
CSS0026509 Camellia sinensis var. sinensis
DCAR_023352 Daucus carota
DCAR_027000 Daucus carota
Dinv44293 Davidia involucrata
Duzib052G0264 Durio zibethinus
Duzib151G0239 Durio zibethinus
ECA248G1830 Erigeron canadensis
Eucgr.H01005 Eucalyptus grandis
FAN07G2165 Fragaria x ananassa
FvH4_4g19570 Fragaria vesca
Glyma.09G036200 Glycine max
Glyma.15G141100 Glycine max
Gohir.A02G054001 Gossypium hirsutum
Gohir.D02G058775 Gossypium hirsutum
Gorai.005G066500 Gossypium raimondii
Haze_01291 Corylus avellana
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla
Hma1.2p1_0129F.1_g060190 Hydrangea macrophylla
Hma1.2p1_0170F.1_g075030 Hydrangea macrophylla
Hma1.2p1_0178F.1_g078280 Hydrangea macrophylla
Hma1.2p1_0178F.1_g078313 Hydrangea macrophylla
Hma1.2p1_0293F.1_g116340 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139000 Hydrangea macrophylla
Hma1.2p1_0400F.1_g144500 Hydrangea macrophylla
Hma1.2p1_0419F.1_g149380 Hydrangea macrophylla
HPP92_017245 Vanilla planifolia
HPP92_027565 Vanilla planifolia
Lalb_Chr15g0089211 Lupinus albus
Lalb_Chr15g0089221 Lupinus albus
Lalb_Chr15g0089231 Lupinus albus
Lalb_Chr18g0058721 Lupinus albus
Lalb_Chr18g0058731 Lupinus albus
Lalb_Chr20g0120901 Lupinus albus
Lj6g0008349 Lotus japonicus
Lj6P690T34 Lonicera japonica
LjContig00081g0023529 Lotus japonicus
Lsat_1_v5_gn_1_41021 Lactuca sativa
MBI18_g17308_MAGBIO Magnolia biondii
MBI19_g03227_MAGBIO Magnolia biondii
MD03G1299200 Malus domestica
MD16G1155100 Malus domestica
Medtr2g034220 Medicago truncatula
MELO3C017910.2 Cucumis melo
Migut.G00051 Erythranthe guttata
Migut.N00045 Erythranthe guttata
MSTRG.21772 Avicennia marina
MSTRG.24819 Avicennia marina
MSTRG.3861 Avicennia marina
Nitab4.5_0000169g0180 Nicotiana tabacum
Nitab4.5_0002218g0040 Nicotiana tabacum
Nn3g21712 Nelumbo nucifera
Nn3g21713 Nelumbo nucifera
Nn4g25584 Nelumbo nucifera
Oeu003757.1 Olea europaea
Oeu032017.1 Olea europaea
Os11g0677400 Oryza sativa ssp. japonica
Os12g0561500 Oryza sativa ssp. japonica
Peaxi162Scf00228g00024 Petunia axillaris
PGR031G3252 Punica granatum
PGR031G3690 Punica granatum
PGSC0003DMG400021845 Solanum tuberosum
Phvul.006G117500 Phaseolus vulgaris
Prupe.1G118800 Prunus persica
Psat1g160600 Pisum sativum
PSO170G5750 Papaver somniferum
PSO357G0458 Papaver somniferum
QL06p011856 Quercus lobata
QL12p019526 Quercus lobata
RcHm_v2.0_Chr4g0424831 Rosa chinensis
Rhsim02G0004500 Rhododendron simsii
Rhsim04G0235100 Rhododendron simsii
SalBow8G0437 Salvia bowleyana
SalBow8G4915 Salvia bowleyana
Sed0001520 Sechium edule
Sed0009222 Sechium edule
SGA_v2.0_scaffold104G30095 Striga asiatica
SGA_v2.0_scaffold473G52104 Striga asiatica
Solyc01g059940.2 Solanum lycopersicum
Sopen01g026080 Solanum pennellii
Sp3g05640 Schrenkiella parvula
TAR362G0759 Trochodendron aralioides
TAR633G1530 Trochodendron aralioides
THA.LOC104802706 Tarenaya hassleriana
THA.LOC104817455 Tarenaya hassleriana
THA.LOC104818886 Tarenaya hassleriana
Thecc.04G299300 Theobroma cacao
Thhalv10022426m.g Eutrema salsugineum
TPR.G27258 Trifolium pratense
TWI09G1381 Tripterygium wilfordii
TWI53G1179 Tripterygium wilfordii
unitig_0.g2583 Utricularia gibba
unitig_22.g6961 Utricularia gibba
unitig_749.g13364 Utricularia gibba
vmacro15186 Vaccinium macrocarpon
VMungo0540G0961 Vigna mungo
VMungo0540G2083 Vigna mungo
Zm00001eb028480 Zea mays
Zm00001eb136950 Zea mays

User provided reference genes

Program Settings