Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19940 Brassica napus
Aa31LG6G170 Aethionema arabicum
Aa31LG6G180 Aethionema arabicum
Aa31sc151G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis
Actinidia02155 Actinidia chinensis
Actinidia14404 Actinidia chinensis
AL7G37230 Arabidopsis lyrata
AL7G37290 Arabidopsis lyrata
Aqoxy3G02814 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea
AT4G17430 Arabidopsis thaliana
ATR0057G109 Amborella trichopoda
Atru.chr9.1271 Acer truncatum
AUR62022412 Chenopodium quinoa
AUR62042169 Chenopodium quinoa
BcaC09g50473 Brassica carinata
BcaNung00094 Brassica carinata
BolC1t02446H Brassica oleracea
BraA01t01920Z Brassica rapa
C01p25020 Brassica napus
CAN.G1178.14 Capsicum annuum
CAN.G410.17 Capsicum annuum
CANSAT21G0669 Cannabis sativa
CARHR224030 Cardamine hirsuta
Carub.0007s2399 Capsella rubella
Ca_17300_v3 Cicer arietinum L.
Ca_17307_v3 Cicer arietinum L.
Cc08_g12130 Coffea canephora
Cc11_g11020 Coffea canephora
CDE02G0403 Ceratophyllum demersum
CDE09G0915 Ceratophyllum demersum
Ciclev10019844m.g Citrus clementina
CiPaw.11G082200 Carya illinoinensis
ClCG01G004250 Citrullus lanatus
COL.COLO4_37119 Corchorus olitorius
CsaV3_5G004450 Cucumis sativus L.
CSS0007358 Camellia sinensis var. sinensis
CSS0008948 Camellia sinensis var. sinensis
CSS0012087 Camellia sinensis var. sinensis
CSS0012403 Camellia sinensis var. sinensis
CSS0035552 Camellia sinensis var. sinensis
CSS0043083 Camellia sinensis var. sinensis
DCAR_008509 Daucus carota
Dinv03497 Davidia involucrata
Dinv39172 Davidia involucrata
Duzib084G1038 Durio zibethinus
Duzib205G0633 Durio zibethinus
EL10Ac1g01729 Beta vulgaris
Eucgr.E00405 Eucalyptus grandis
FAN04G2833 Fragaria x ananassa
FAN08G2842 Fragaria x ananassa
FAN13G2335 Fragaria x ananassa
FAN18G1401 Fragaria x ananassa
FAN18G3259 Fragaria x ananassa
FvH4_5g19490 Fragaria vesca
Glyma.13G055300 Glycine max
Glyma.19G032167 Glycine max
Glyma.19G032233 Glycine max
Gohir.A03G006700 Gossypium hirsutum
Gohir.A09G196600 Gossypium hirsutum
Gohir.D03G165500 Gossypium hirsutum
Gohir.D09G191200 Gossypium hirsutum
Gorai.003G175200 Gossypium raimondii
Gorai.006G214000 Gossypium raimondii
GSVIVG01005817001 Vitis vinifera
HanXRQChr16g0501101 Helianthus annuus
Haze_07941 Corylus avellana
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla
Hund20780 Selenicereus undatus
Hund30921 Selenicereus undatus
Lalb_Chr07g0190101 Lupinus albus
Lj1g0021170 Lotus japonicus
Lj2A224T24 Lonicera japonica
Lj2g0010165 Lotus japonicus
Lsat_1_v5_gn_6_59361 Lactuca sativa
Manes.01G083800 Manihot esculenta
Mapoly0027s0023 Marchantia polymorpha
Mapoly0048s0017 Marchantia polymorpha
MD04G1060600 Malus domestica
MD06G1054000 Malus domestica
Medtr8g104850 Medicago truncatula
MELO3C005514.2 Cucumis melo
Migut.A01137 Erythranthe guttata
Nitab4.5_0001381g0010 Nicotiana tabacum
Nitab4.5_0003050g0020 Nicotiana tabacum
Nn6g33867 Nelumbo nucifera
Oeu036348.1 Olea europaea
Oeu057691.1 Olea europaea
Os10g0561200 Oryza sativa ssp. japonica
Peaxi162Scf00214g00035 Petunia axillaris
PGR042G2173 Punica granatum
PGSC0003DMG400004829 Solanum tuberosum
Phvul.004G038100 Phaseolus vulgaris
Potri.003G079400 Populus trichocarpa
Pp3c6_17579 Physcomitrium patens
Pp3c6_17590 Physcomitrium patens
Prupe.5G065000 Prunus persica
Psat7g009600 Pisum sativum
PSO063G3551 Papaver somniferum
PSO782G4316 Papaver somniferum
QL05p056241 Quercus lobata
QL05p056282 Quercus lobata
QL05p056380 Quercus lobata
QL12p011266 Quercus lobata
RcHm_v2.0_Chr7g0204071 Rosa chinensis
Rhsim03G0144800 Rhododendron simsii
Sabra03G0049500 Salix brachista
SalBow5G2168 Salvia bowleyana
Sc22g0001010 Simmondsia chinensis
Sed0012710 Sechium edule
Sed0015384 Sechium edule
SEGI_37405 Sequoiadendron giganteum
SGA_v2.0_scaffold199G41222 Striga asiatica
SHI07684 Sapria himalayana
SMO358G0726 Selaginella moellendorffii
Solyc08g078380.3 Solanum lycopersicum
Sopen08g026870 Solanum pennellii
TAR365G0013 Trochodendron aralioides
TAR629G0196 Trochodendron aralioides
THA.LOC104806667 Tarenaya hassleriana
Thecc.03G247800 Theobroma cacao
Thhalv10000864m.g Eutrema salsugineum
Thhalv10024957m.g Eutrema salsugineum
TPR.G32686 Trifolium pratense
TWI15G0579 Tripterygium wilfordii
TWI81G0674 Tripterygium wilfordii
unitig_0.g1051 Utricularia gibba
vmacro00008 Vaccinium macrocarpon
vmacro00009 Vaccinium macrocarpon
vmacro00011 Vaccinium macrocarpon
VMungo0464G0479 Vigna mungo
Zm00001eb023170 Zea mays

User provided reference genes

Program Settings