Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p62360 Brassica napus
Aa31LG1G840 Aethionema arabicum
Aa31sc139G40 Aethionema arabicum
Actinidia31900 Actinidia chinensis
AL1G26090 Arabidopsis lyrata
Aqoxy3G03402 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C6ZMY5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6MMNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1YF1C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NUP0F7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YAXL0T Arachis hypogaea
AT1G14205 Arabidopsis thaliana
ATR0681G265 Amborella trichopoda
Atru.chr11.1777 Acer truncatum
AUR62005804 Chenopodium quinoa
AUR62032794 Chenopodium quinoa
BcaB08g34377 Brassica carinata
BcaC07g41589 Brassica carinata
BolC8t52144H Brassica oleracea
BraA09t41601Z Brassica rapa
C08p45920 Brassica napus
CAN.G1604.4 Capsicum annuum
CANSAT64G2506 Cannabis sativa
CARHR014620 Cardamine hirsuta
Carub.0001s1389 Capsella rubella
Ca_04813_v3 Cicer arietinum L.
Cc00_g24810 Coffea canephora
Cc00_g25960 Coffea canephora
Cc00_g33910 Coffea canephora
Cc00_g33980 Coffea canephora
Cc00_g35260 Coffea canephora
Cc01_g00500 Coffea canephora
Cc01_g02200 Coffea canephora
Cc01_g02300 Coffea canephora
CDE04G3278 Ceratophyllum demersum
Cfa008972 Carpinus fangiana
Ciclev10032918m.g Citrus clementina
CiPaw.05G134200 Carya illinoinensis
ClCG05G024220 Citrullus lanatus
COL.COLO4_22957 Corchorus olitorius
Cpa.g.sc128.36 Carica papaya
CsaV3_5G032760 Cucumis sativus L.
CsaV3_5G032770 Cucumis sativus L.
CSS0032710 Camellia sinensis var. sinensis
DCAR_007157 Daucus carota
Dinv34149 Davidia involucrata
Duzib251G0762 Durio zibethinus
ECA232G4216 Erigeron canadensis
EL10Ac2g03567 Beta vulgaris
Eucgr.B03215 Eucalyptus grandis
FAN04G0710 Fragaria x ananassa
FAN07G0010 Fragaria x ananassa
FAN07G1296 Fragaria x ananassa
FAN07G1335 Fragaria x ananassa
FAN07G1573 Fragaria x ananassa
FAN08G3274 Fragaria x ananassa
FAN12G3611 Fragaria x ananassa
FAN13G2547 Fragaria x ananassa
FAN14G0628 Fragaria x ananassa
FAN17G0023 Fragaria x ananassa
FAN17G2055 Fragaria x ananassa
FAN18G1300 Fragaria x ananassa
FAN18G3749 Fragaria x ananassa
FAN22G1556 Fragaria x ananassa
FAN22G1611 Fragaria x ananassa
FAN24G2090 Fragaria x ananassa
FvH4_4g31170 Fragaria vesca
FvH4_4g31280 Fragaria vesca
FvH4_5g23030 Fragaria vesca
FvH4_6g19250 Fragaria vesca
FvH4_7g03450 Fragaria vesca
Glyma.01G048600 Glycine max
Glyma.02G108200 Glycine max
Gohir.A12G164500 Gossypium hirsutum
Gohir.D12G167600 Gossypium hirsutum
Gorai.008G180500 Gossypium raimondii
GSVIVG01023016001 Vitis vinifera
HanXRQChr09g0256931 Helianthus annuus
Haze_12004 Corylus avellana
Hma1.2p1_0795F.1_g218920 Hydrangea macrophylla
HPP92_003354 Vanilla planifolia
HPP92_003355 Vanilla planifolia
Hund25229 Selenicereus undatus
Lalb_Chr10g0098351 Lupinus albus
Lj2g0006642 Lotus japonicus
Lj3A1037T78 Lonicera japonica
Lsat_1_v5_gn_4_145980 Lactuca sativa
Manes.05G102100 Manihot esculenta
MBI05_g34363_MAGBIO Magnolia biondii
MD16G1072000 Malus domestica
Medtr5g041280 Medicago truncatula
Medtr5g041290 Medicago truncatula
MELO3C012102.2 Cucumis melo
Migut.L01281 Erythranthe guttata
MSTRG.706 Avicennia marina
Nitab4.5_0001555g0030 Nicotiana tabacum
Nitab4.5_0003950g0020 Nicotiana tabacum
Nn4g23184 Nelumbo nucifera
Nn4g23185 Nelumbo nucifera
Oeu055111.1 Olea europaea
Os03g0169400 Oryza sativa ssp. japonica
Os09g0439050 Oryza sativa ssp. japonica
Peaxi162Scf00222g00523 Petunia axillaris
PGR102G3221 Punica granatum
PGSC0003DMG400018425 Solanum tuberosum
Phvul.003G017400 Phaseolus vulgaris
Potri.008G087100 Populus trichocarpa
Prupe.1G275600 Prunus persica
Psat2g119200 Pisum sativum
PSO339G5942 Papaver somniferum
QL03p068731 Quercus lobata
RcHm_v2.0_Chr4g0439701 Rosa chinensis
RcHm_v2.0_Chr6g0288631 Rosa chinensis
Rhsim12G0064100 Rhododendron simsii
Sabra08G0064900 Salix brachista
SalBow2G2920 Salvia bowleyana
Sc14g0008110 Simmondsia chinensis
Sed0019595 Sechium edule
SEGI_26874 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12777 Striga asiatica
SGA_v2.0_scaffold47G17610 Striga asiatica
Solyc05g007910.3 Solanum lycopersicum
Sopen05g003760 Solanum pennellii
Sp1g12550 Schrenkiella parvula
THA.LOC104801796 Tarenaya hassleriana
Thecc.02G344900 Theobroma cacao
Thhalv10008948m.g Eutrema salsugineum
TPR.G39224 Trifolium pratense
TPR.G433 Trifolium pratense
TWI31G0211 Tripterygium wilfordii
unitig_22.g6513 Utricularia gibba
vmacro01263 Vaccinium macrocarpon
VMungo1215G0821 Vigna mungo
Zm00001eb005360 Zea mays
Zm00001eb402360 Zea mays

User provided reference genes

Program Settings