Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39750 Brassica napus
A07p26310 Brassica napus
Aa31LG4G50 Aethionema arabicum
Actinidia09002 Actinidia chinensis
AL2G41770 Arabidopsis lyrata
AL3G29050 Arabidopsis lyrata
Aqoxy7G01470 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.U1FWF5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z2G3LM Arachis hypogaea
AT1G79780 Arabidopsis thaliana
AT3G16300 Arabidopsis thaliana
ATR0705G087 Amborella trichopoda
ATR0705G122 Amborella trichopoda
Atru.chr1.3497 Acer truncatum
AUR62022181 Chenopodium quinoa
AUR62031884 Chenopodium quinoa
BcaB04g18894 Brassica carinata
BcaB06g25723 Brassica carinata
BcaC01g03830 Brassica carinata
BcaC05g28895 Brassica carinata
BolC3t17024H Brassica oleracea
BolC3t17097H Brassica oleracea
BolC6t38039H Brassica oleracea
BraA03t13125Z Brassica rapa
BraA05t22147Z Brassica rapa
BraA07t30275Z Brassica rapa
C03p48190 Brassica napus
C06p28700 Brassica napus
CANSAT56G1056 Cannabis sativa
CARHR049040 Cardamine hirsuta
CARHR074730 Cardamine hirsuta
CARHR074740 Cardamine hirsuta
CARHR074750 Cardamine hirsuta
CARHR091510 Cardamine hirsuta
Carub.0002s2773 Capsella rubella
Carub.0003s1605 Capsella rubella
Ca_23241_v3 Cicer arietinum L.
Cc04_g02710 Coffea canephora
CDE02G4152 Ceratophyllum demersum
Cfa003665 Carpinus fangiana
Ciclev10026574m.g Citrus clementina
CiPaw.01G232900 Carya illinoinensis
CiPaw.02G147000 Carya illinoinensis
ClCG09G000040 Citrullus lanatus
Cpa.g.c29422 Carica papaya
Cpa.g.c39301 Carica papaya
CsaV3_7G035420 Cucumis sativus L.
CSS0002541 Camellia sinensis var. sinensis
CSS0006657 Camellia sinensis var. sinensis
CSS0032474 Camellia sinensis var. sinensis
DCAR_016197 Daucus carota
DCAR_026348 Daucus carota
Dinv30452 Davidia involucrata
Dinv37994 Davidia involucrata
Duzib160G0019 Durio zibethinus
Duzib192G0605 Durio zibethinus
ECA247G0174 Erigeron canadensis
EL10Ac9g22102 Beta vulgaris
Eucgr.F03064 Eucalyptus grandis
FAN02G4216 Fragaria x ananassa
FAN05G5290 Fragaria x ananassa
FAN09G2308 Fragaria x ananassa
FAN14G0018 Fragaria x ananassa
FvH4_6g32160 Fragaria vesca
Glyma.07G017000 Glycine max
Gohir.A02G118700 Gossypium hirsutum
Gohir.D03G059300 Gossypium hirsutum
Gorai.003G063300 Gossypium raimondii
GSVIVG01017014001 Vitis vinifera
HanXRQChr02g0032191 Helianthus annuus
HanXRQChr09g0275891 Helianthus annuus
HanXRQChr16g0501231 Helianthus annuus
Haze_15828 Corylus avellana
Hma1.2p1_1689F.1_g297591 Hydrangea macrophylla
Hund06653 Selenicereus undatus
Lalb_Chr04g0262901 Lupinus albus
Lj3g0008110 Lotus japonicus
Lj5A55G45 Lonicera japonica
Lj9A511T51 Lonicera japonica
Lj9C524T15 Lonicera japonica
Lsat_1_v5_gn_1_34600 Lactuca sativa
Lsat_1_v5_gn_4_99921 Lactuca sativa
Manes.04G132400 Manihot esculenta
Manes.11G035100 Manihot esculenta
MBI04_g40322_MAGBIO Magnolia biondii
MBI04_g44953_MAGBIO Magnolia biondii
MBI19_g26309_MAGBIO Magnolia biondii
MD09G1205900 Malus domestica
Medtr8g013900 Medicago truncatula
MELO3C024451.2 Cucumis melo
Migut.I00910 Erythranthe guttata
MSTRG.11037 Avicennia marina
MSTRG.22648 Avicennia marina
Nn2g11615 Nelumbo nucifera
Oeu050609.1 Olea europaea
Os01g0725400 Oryza sativa ssp. japonica
Peaxi162Scf00038g00842 Petunia axillaris
PGR102G2433 Punica granatum
PGSC0003DMG400002535 Solanum tuberosum
Phvul.010G146500 Phaseolus vulgaris
Potri.001G188000 Populus trichocarpa
Potri.003G050400 Populus trichocarpa
Prupe.3G061300 Prunus persica
Prupe.3G065500 Prunus persica
Psat4g197440 Pisum sativum
PSO173G0088 Papaver somniferum
PSO832G1217 Papaver somniferum
QL05p020542 Quercus lobata
RcHm_v2.0_Chr2g0140051 Rosa chinensis
Rhsim12G0202300 Rhododendron simsii
Sabra01G0152800 Salix brachista
Sabra03G0028400 Salix brachista
SalBow1G6954 Salvia bowleyana
SalBow2G2342 Salvia bowleyana
Sc15g0001950 Simmondsia chinensis
Sc15g0002000 Simmondsia chinensis
Sed0001710 Sechium edule
Solyc03g120870.3 Solanum lycopersicum
Sopen03g039690 Solanum pennellii
Sp3g14670 Schrenkiella parvula
Sp5g35990 Schrenkiella parvula
TAR383G0371 Trochodendron aralioides
TAR626G0582 Trochodendron aralioides
THA.LOC104813551 Tarenaya hassleriana
THA.LOC104817966 Tarenaya hassleriana
Thecc.06G097400 Theobroma cacao
Thhalv10019180m.g Eutrema salsugineum
Thhalv10021518m.g Eutrema salsugineum
TPR.G35018 Trifolium pratense
TWI18G0404 Tripterygium wilfordii
TWI75G0681 Tripterygium wilfordii
unitig_46.g18459 Utricularia gibba
vmacro16985 Vaccinium macrocarpon
vmacro17018 Vaccinium macrocarpon
VMungo0331G0354 Vigna mungo

User provided reference genes

Program Settings