Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17640 Brassica napus
A04p24230 Brassica napus
A05p14120 Brassica napus
Aa31LG5G7440 Aethionema arabicum
Actinidia38519 Actinidia chinensis
Ah.10g033660 Amaranthus hybridus
AL4G26750 Arabidopsis lyrata
Aqoxy7G02690 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8U1ME7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YLZA1F Arachis hypogaea
AT2G31490 Arabidopsis thaliana
ATR0568G059 Amborella trichopoda
Atru.chr10.916 Acer truncatum
Atru.chr10.931 Acer truncatum
AUR62020709 Chenopodium quinoa
AUR62028015 Chenopodium quinoa
BcaB01g04043 Brassica carinata
BcaB02g10394 Brassica carinata
BcaB06g28537 Brassica carinata
BcaC02g07993 Brassica carinata
BcaC02g11258 Brassica carinata
BolC3t14450H Brassica oleracea
BolC4t23397H Brassica oleracea
BolC4t27587H Brassica oleracea
BraA03t11029Z Brassica rapa
C03p20730 Brassica napus
C04p60960 Brassica napus
CANSAT01G0847 Cannabis sativa
CARHR125130 Cardamine hirsuta
Carub.0004s1281 Capsella rubella
Ca_25629_v3 Cicer arietinum L.
CBR_g40455 Chara braunii
Cc00_g00480 Coffea canephora
CDE02G1938 Ceratophyllum demersum
CDE06G0649 Ceratophyllum demersum
Cfa020734 Carpinus fangiana
Ciclev10010105m.g Citrus clementina
CiPaw.16G103100 Carya illinoinensis
ClCG06G014030 Citrullus lanatus
COL.COLO4_33448 Corchorus olitorius
Cpa.g.sc115.33 Carica papaya
CsaV3_1G004610 Cucumis sativus L.
CSS0014288 Camellia sinensis var. sinensis
DCAR_019791 Daucus carota
Dinv06659 Davidia involucrata
Duzib170G0040 Durio zibethinus
Duzib177G0654 Durio zibethinus
ECA240G4690 Erigeron canadensis
EL10Ac2g03641 Beta vulgaris
Eucgr.D02622 Eucalyptus grandis
FAN07G1689 Fragaria x ananassa
FAN11G1086 Fragaria x ananassa
FAN12G2290 Fragaria x ananassa
FAN17G0140 Fragaria x ananassa
FAN17G1913 Fragaria x ananassa
FAN22G1024 Fragaria x ananassa
FvH4_4g06270 Fragaria vesca
Glyma.07G130200 Glycine max
Gohir.A03G029700 Gossypium hirsutum
Gohir.D03G138800 Gossypium hirsutum
Gorai.003G145600 Gossypium raimondii
GSVIVG01029731001 Vitis vinifera
HanXRQChr03g0064531 Helianthus annuus
HanXRQChr09g0243241 Helianthus annuus
HanXRQChr13g0388231 Helianthus annuus
Hma1.2p1_0314F.1_g121950 Hydrangea macrophylla
HPP92_021358 Vanilla planifolia
Hund03236 Selenicereus undatus
Lalb_Chr14g0361711 Lupinus albus
Lj2g0002952 Lotus japonicus
Lj5A722T6 Lonicera japonica
Lsat_1_v5_gn_7_59680 Lactuca sativa
Manes.04G088600 Manihot esculenta
Manes.11G087000 Manihot esculenta
Mapoly0005s0214 Marchantia polymorpha
Mapoly0005s0215 Marchantia polymorpha
MCO07G159 Micromonas commoda
MD13G1234900 Malus domestica
MD16G1239700 Malus domestica
Medtr6g093010 Medicago truncatula
Medtr8g107150 Medicago truncatula
MELO3C017388.2 Cucumis melo
MELO3C019212.2 Cucumis melo
Migut.J00829 Erythranthe guttata
Migut.K01179 Erythranthe guttata
Migut.L00209 Erythranthe guttata
Migut.L00210 Erythranthe guttata
Nitab4.5_0000413g0090 Nicotiana tabacum
Nitab4.5_0004188g0020 Nicotiana tabacum
Nn2g12785 Nelumbo nucifera
Os01g0732100 Oryza sativa ssp. japonica
Os01g0750800 Oryza sativa ssp. japonica
Peaxi162Scf00204g00039 Petunia axillaris
Peaxi162Scf00320g00055 Petunia axillaris
Peaxi162Scf00906g00224 Petunia axillaris
PGR142G0999 Punica granatum
Phvul.004G177400 Phaseolus vulgaris
Phvul.010G060700 Phaseolus vulgaris
Potri.006G077400 Populus trichocarpa
Pp3c16_220 Physcomitrium patens
Pp3c25_300 Physcomitrium patens
Prupe.1G065800 Prunus persica
Psat1g051120 Pisum sativum
PSO063G5181 Papaver somniferum
PSO170G3580 Papaver somniferum
QL11p009271 Quercus lobata
RcHm_v2.0_Chr4g0397991 Rosa chinensis
RcHm_v2.0_Chr6g0293601 Rosa chinensis
RcHm_v2.0_Chr6g0293611 Rosa chinensis
Sabra06G0058600 Salix brachista
SalBow6G6230 Salvia bowleyana
Sc09g0007480 Simmondsia chinensis
Sed0021240 Sechium edule
SEGI_08291 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35734 Striga asiatica
SHI03111 Sapria himalayana
SHI37948 Sapria himalayana
SMO141G0046 Selaginella moellendorffii
Solyc05g046390.3 Solanum lycopersicum
Solyc09g059220.1 Solanum lycopersicum
Sopen05g027690 Solanum pennellii
Sp4g13950 Schrenkiella parvula
TAR383G0493 Trochodendron aralioides
TAR626G1073 Trochodendron aralioides
THA.LOC104815318 Tarenaya hassleriana
THA.LOC109116496 Tarenaya hassleriana
THA.LOC109117265 Tarenaya hassleriana
Thecc.06G194900 Theobroma cacao
Thhalv10017500m.g Eutrema salsugineum
TPR.G21357 Trifolium pratense
TWI63G0907 Tripterygium wilfordii
unitig_26.g9132 Utricularia gibba
vmacro20778 Vaccinium macrocarpon
Zm00001eb368480 Zea mays
Zm00001eb370910 Zea mays

User provided reference genes

Program Settings