Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17590 Brassica napus
A04p24280 Brassica napus
Aa31LG5G5560 Aethionema arabicum
Actinidia19554 Actinidia chinensis
Ah.02g128910 Amaranthus hybridus
AL4G26660 Arabidopsis lyrata
Aqoxy5G03167 Aquilegia oxysepala
Aqoxy5G03273 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea
AT2G31410 Arabidopsis thaliana
ATR0559G324 Amborella trichopoda
Atru.chr6.2652 Acer truncatum
Atru.chr6.2684 Acer truncatum
AUR62036639 Chenopodium quinoa
BcaB01g04046 Brassica carinata
BcaC02g07982 Brassica carinata
BolC3t14453H Brassica oleracea
BolC4t27596H Brassica oleracea
BraA03t11026Z Brassica rapa
BraA04t17947Z Brassica rapa
C03p20700 Brassica napus
C04p61110 Brassica napus
CAN.G473.157 Capsicum annuum
CANSAT64G2014 Cannabis sativa
CARHR125040 Cardamine hirsuta
Carub.0004s1273 Capsella rubella
Ca_08134_v3 Cicer arietinum L.
CBR_g4589 Chara braunii
Cc07_g01230 Coffea canephora
CDE06G2057 Ceratophyllum demersum
Cfa007167 Carpinus fangiana
Cfa016824 Carpinus fangiana
Ciclev10016760m.g Citrus clementina
CiPaw.03G002600 Carya illinoinensis
ClCG01G007820 Citrullus lanatus
COL.COLO4_13365 Corchorus olitorius
Cpa.g.sc9.286 Carica papaya
CsaV3_5G024890 Cucumis sativus L.
CSS0008758 Camellia sinensis var. sinensis
CSS0019060 Camellia sinensis var. sinensis
CSS0020873 Camellia sinensis var. sinensis
DCAR_014472 Daucus carota
Dinv33283 Davidia involucrata
Duzib187G1006 Durio zibethinus
Duzib264G0852 Durio zibethinus
ECA238G1999 Erigeron canadensis
EL10Ac1g01380 Beta vulgaris
EL10Ac6g13393 Beta vulgaris
EL10As7g23751 Beta vulgaris
Eucgr.G01937 Eucalyptus grandis
FAN12G1178 Fragaria x ananassa
FAN17G0918 Fragaria x ananassa
FAN21G1155 Fragaria x ananassa
FAN22G1114 Fragaria x ananassa
FAN25G1272 Fragaria x ananassa
FvH4_3g27021 Fragaria vesca
FvH4_4g34010 Fragaria vesca
Glyma.16G049200 Glycine max
Glyma.19G102200 Glycine max
Gohir.A07G232500 Gossypium hirsutum
Gohir.D07G239700 Gossypium hirsutum
Gorai.001G275800 Gossypium raimondii
HanXRQChr14g0451391 Helianthus annuus
Haze_14943 Corylus avellana
Haze_19868 Corylus avellana
Haze_19869 Corylus avellana
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla
HPP92_011631 Vanilla planifolia
Lalb_Chr14g0364061 Lupinus albus
Lalb_Chr22g0359961 Lupinus albus
Lj1g0015500 Lotus japonicus
Lju41C60T1 Lonicera japonica
Lsat_1_v5_gn_2_94961 Lactuca sativa
Manes.04G092600 Manihot esculenta
Mapoly0127s0012 Marchantia polymorpha
MBI07_g07331_MAGBIO Magnolia biondii
MD00G1041400 Malus domestica
MD05G1139400 Malus domestica
Medtr7g083930 Medicago truncatula
MELO3C005111.2 Cucumis melo
Migut.K01484 Erythranthe guttata
Nitab4.5_0000519g0260 Nicotiana tabacum
Nitab4.5_0002172g0090 Nicotiana tabacum
Nn4g22156 Nelumbo nucifera
Oeu003419.1 Olea europaea
Os02g0595400 Oryza sativa ssp. japonica
Peaxi162Scf00420g00083 Petunia axillaris
PGR142G3540 Punica granatum
PGSC0003DMG400035897 Solanum tuberosum
Phvul.001G085400 Phaseolus vulgaris
Potri.002G237000 Populus trichocarpa
Potri.014G145600 Populus trichocarpa
Pp3c11_25830 Physcomitrium patens
Prupe.2G125900 Prunus persica
Psat3g093680 Pisum sativum
Psat4g074560 Pisum sativum
Psat4g074600 Pisum sativum
PSO017G0758 Papaver somniferum
PSO478G2072 Papaver somniferum
QL11p027744 Quercus lobata
RcHm_v2.0_Chr1g0315821 Rosa chinensis
RcHm_v2.0_Chr2g0115461 Rosa chinensis
RcHm_v2.0_Chr2g0117931 Rosa chinensis
RcHm_v2.0_Chr5g0026441 Rosa chinensis
RcHm_v2.0_Chr5g0049531 Rosa chinensis
RcHm_v2.0_Chr5g0057561 Rosa chinensis
RcHm_v2.0_Chr6g0252241 Rosa chinensis
RcHm_v2.0_Chr6g0272931 Rosa chinensis
RcHm_v2.0_Chr6g0295141 Rosa chinensis
RcHm_v2.0_Chr7g0240621 Rosa chinensis
Rhsim08G0039300 Rhododendron simsii
Sabra02G0180500 Salix brachista
SalBow7G1413 Salvia bowleyana
Sc07g0003710 Simmondsia chinensis
Sc14g0008230 Simmondsia chinensis
Sed0006238 Sechium edule
Sed0018343 Sechium edule
SGA_v2.0_scaffold47G17637 Striga asiatica
SHI02353 Sapria himalayana
Solyc02g094490.4 Solanum lycopersicum
Solyc03g083260.1 Solanum lycopersicum
Sopen02g039170 Solanum pennellii
Sp4g13900 Schrenkiella parvula
TAR371G0439 Trochodendron aralioides
TAR628G1373 Trochodendron aralioides
TAR629G2671 Trochodendron aralioides
THA.LOC104815860 Tarenaya hassleriana
THA.LOC104826200 Tarenaya hassleriana
Thecc.04G047000 Theobroma cacao
Thhalv10017252m.g Eutrema salsugineum
TPR.G10334 Trifolium pratense
TWI34G0826 Tripterygium wilfordii
unitig_92.g28207 Utricularia gibba
Zm00001eb183750 Zea mays
Zm00001eb246070 Zea mays

User provided reference genes

Program Settings