Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33660 Brassica napus
A09p10920 Brassica napus
Actinidia00594 Actinidia chinensis
Ah.11g039720 Amaranthus hybridus
AL8G19700 Arabidopsis lyrata
AL8G19720 Arabidopsis lyrata
AT5G42146 Arabidopsis thaliana
ATR0810G150 Amborella trichopoda
Atru.chr13.290 Acer truncatum
Atru.chr5.3224 Acer truncatum
BcaB07g30277 Brassica carinata
BcaB07g31777 Brassica carinata
BcaC03g17246 Brassica carinata
BcaC04g23031 Brassica carinata
BolC2t11266H Brassica oleracea
BolC9t54179H Brassica oleracea
BraA02t08386Z Brassica rapa
BraA09t36732Z Brassica rapa
C02p51810 Brassica napus
C09p12890 Brassica napus
CANSAT01G1229 Cannabis sativa
CANSAT25G0582 Cannabis sativa
CARHR284740 Cardamine hirsuta
Carub.0008s0720 Capsella rubella
Ca_18999_v3 Cicer arietinum L.
Cc02_g16550 Coffea canephora
Cfa005180 Carpinus fangiana
Cfa005181 Carpinus fangiana
Cfa005182 Carpinus fangiana
Cfa013952 Carpinus fangiana
Ciclev10003161m.g Citrus clementina
Ciclev10029543m.g Citrus clementina
Ciclev10029854m.g Citrus clementina
CiPaw.05G077000 Carya illinoinensis
CiPaw.07G149600 Carya illinoinensis
ClCG02G011420 Citrullus lanatus
ClCG05G018250 Citrullus lanatus
COL.COLO4_17253 Corchorus olitorius
Cpa.g.sc26.44 Carica papaya
Cpa.g.sc37.193 Carica papaya
CsaV3_2G015680 Cucumis sativus L.
CsaV3_2G029540 Cucumis sativus L.
CsaV3_3G045890 Cucumis sativus L.
CSS0037401 Camellia sinensis var. sinensis
DCAR_003698 Daucus carota
DCAR_006051 Daucus carota
Duzib132G0889 Durio zibethinus
EL10Ac1g02194 Beta vulgaris
Eucgr.F00586 Eucalyptus grandis
FAN04G1699 Fragaria x ananassa
FvH4_5g34311 Fragaria vesca
Glyma.04G005451 Glycine max
Glyma.04G024200 Glycine max
Glyma.08G148400 Glycine max
Glyma.12G024300 Glycine max
Gohir.A06G004000 Gossypium hirsutum
Gohir.A12G039400 Gossypium hirsutum
Gohir.D06G006900 Gossypium hirsutum
Gohir.D12G033000 Gossypium hirsutum
Gorai.008G033800 Gossypium raimondii
Gorai.010G004200 Gossypium raimondii
Haze_02200 Corylus avellana
Haze_22635 Corylus avellana
Lalb_Chr03g0024681 Lupinus albus
Lalb_Chr11g0061921 Lupinus albus
Lj1g0006182 Lotus japonicus
Lsat_1_v5_gn_2_9581 Lactuca sativa
Lsat_1_v5_gn_8_125861 Lactuca sativa
Manes.04G078400 Manihot esculenta
Manes.05G147300 Manihot esculenta
MBI05_g33718_MAGBIO Magnolia biondii
MBI05_g46324_MAGBIO Magnolia biondii
MBI05_g46327_MAGBIO Magnolia biondii
MD05G1115600 Malus domestica
MD08G1013100 Malus domestica
MD10G1118100 Malus domestica
Medtr3g113930 Medicago truncatula
Medtr3g117720 Medicago truncatula
Medtr4g075490 Medicago truncatula
MELO3C003749.2 Cucumis melo
MELO3C011013.2 Cucumis melo
MELO3C020779.2 Cucumis melo
Migut.C00838 Erythranthe guttata
Migut.N01283 Erythranthe guttata
Migut.N03162 Erythranthe guttata
Nitab4.5_0002561g0020 Nicotiana tabacum
Nn1g05896 Nelumbo nucifera
Nn5g30142 Nelumbo nucifera
Oeu027542.1 Olea europaea
Oeu037538.1 Olea europaea
Os03g0858200 Oryza sativa ssp. japonica
Peaxi162Scf00400g00087 Petunia axillaris
Peaxi162Scf00438g00833 Petunia axillaris
PGR031G2508 Punica granatum
PGR042G3858 Punica granatum
PGSC0003DMG400009937 Solanum tuberosum
Phvul.009G000100 Phaseolus vulgaris
Phvul.009G017000 Phaseolus vulgaris
Phvul.011G026400 Phaseolus vulgaris
Phvul.011G178000 Phaseolus vulgaris
Potri.002G022100 Populus trichocarpa
Potri.004G167800 Populus trichocarpa
Potri.009G129301 Populus trichocarpa
Prupe.1G365100 Prunus persica
Prupe.8G160400 Prunus persica
PSO170G6562 Papaver somniferum
QL02p011637 Quercus lobata
QL11p047517 Quercus lobata
RcHm_v2.0_Chr6g0245271 Rosa chinensis
RcHm_v2.0_Chr6g0302871 Rosa chinensis
Sabra09G0098800 Salix brachista
SalBow8G4445 Salvia bowleyana
Sc18g0006670 Simmondsia chinensis
Sed0014046 Sechium edule
Sed0014638 Sechium edule
Sed0019554 Sechium edule
Sed0021833 Sechium edule
SGA_v2.0_scaffold390G50608 Striga asiatica
SHI08068 Sapria himalayana
Solyc04g081460.2 Solanum lycopersicum
Sopen04g035070 Solanum pennellii
Sp2g14650 Schrenkiella parvula
TAR376G0138 Trochodendron aralioides
TAR625G1501 Trochodendron aralioides
THA.LOC104821582 Tarenaya hassleriana
Thecc.02G067200 Theobroma cacao
Thecc.08G044700 Theobroma cacao
Thhalv10015257m.g Eutrema salsugineum
TPR.G34542 Trifolium pratense
TPR.G38487 Trifolium pratense
TWI56G0219 Tripterygium wilfordii
unitig_32.g11135 Utricularia gibba
VMungo1127G1792 Vigna mungo
VMungo1309G2498 Vigna mungo
Zm00001eb210440 Zea mays

User provided reference genes

Program Settings