Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p08250 Brassica napus
Aa31LG8G10800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4909 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis
Actinidia03489 Actinidia chinensis
Ah.06g195410 Amaranthus hybridus
AL3G39270 Arabidopsis lyrata
AL8G20410 Arabidopsis lyrata
AL8G20480 Arabidopsis lyrata
AL8G20560 Arabidopsis lyrata
Aqoxy1G00698 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea
AT3G24080 Arabidopsis thaliana
ATR0307G120 Amborella trichopoda
Atru.chr12.1744 Acer truncatum
AUR62029295 Chenopodium quinoa
AUR62041171 Chenopodium quinoa
BcaB06g26592 Brassica carinata
BcaC06g35627 Brassica carinata
BolC7t41765H Brassica oleracea
BraA07t28608Z Brassica rapa
C02p46030 Brassica napus
C07p12790 Brassica napus
CAN.G219.49 Capsicum annuum
CANSAT35G0128 Cannabis sativa
CARHR100150 Cardamine hirsuta
Carub.0003s2445 Capsella rubella
Ca_00849_v3 Cicer arietinum L.
CBR_g46717 Chara braunii
Cc10_g09550 Coffea canephora
CDE09G0189 Ceratophyllum demersum
Cfa006250 Carpinus fangiana
Cfa025790 Carpinus fangiana
Ciclev10011241m.g Citrus clementina
CiPaw.07G081600 Carya illinoinensis
ClCG09G009940 Citrullus lanatus
COL.COLO4_36609 Corchorus olitorius
Cpa.g.sc48.98 Carica papaya
Cre10.g441450 Chlamydomonas reinhardtii
CsaV3_4G029120 Cucumis sativus L.
CsaV3_6G006850 Cucumis sativus L.
CSS0001117 Camellia sinensis var. sinensis
CSS0028855 Camellia sinensis var. sinensis
CSS0043370 Camellia sinensis var. sinensis
DCAR_014109 Daucus carota
Dinv27342 Davidia involucrata
Dinv27343 Davidia involucrata
Dinv40379 Davidia involucrata
Duzib168G0454 Durio zibethinus
ECA234G3960 Erigeron canadensis
Eucgr.H01410 Eucalyptus grandis
FvH4_6g00350 Fragaria vesca
Glyma.09G025000 Glycine max
Glyma.13G144202 Glycine max
Glyma.15G131100 Glycine max
Gohir.A08G226800 Gossypium hirsutum
Gohir.D08G247200 Gossypium hirsutum
Gorai.004G263700 Gossypium raimondii
HanXRQChr16g0529541 Helianthus annuus
Haze_04583 Corylus avellana
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla
HPP92_010851 Vanilla planifolia
Lalb_Chr18g0058031 Lupinus albus
Lj2C388T1 Lonicera japonica
Lj6g0014403 Lotus japonicus
Lsat_1_v5_gn_4_15540 Lactuca sativa
Manes.13G004400 Manihot esculenta
Mapoly0029s0120 Marchantia polymorpha
Mapoly0032s0003 Marchantia polymorpha
MBI13_g30854_MAGBIO Magnolia biondii
MCO14G354 Micromonas commoda
MD04G1246400 Malus domestica
MD04G1246500 Malus domestica
MD12G1263700 Malus domestica
Medtr2g030390 Medicago truncatula
MELO3C000397.2 Cucumis melo
MELO3C003738.2 Cucumis melo
MELO3C017820.2 Cucumis melo
Migut.C01153 Erythranthe guttata
MSTRG.1463 Avicennia marina
MSTRG.22873 Avicennia marina
Nitab4.5_0000193g0130 Nicotiana tabacum
Nitab4.5_0001290g0080 Nicotiana tabacum
Nitab4.5_0003319g0010 Nicotiana tabacum
Nitab4.5_0005621g0050 Nicotiana tabacum
Nitab4.5_0005621g0090 Nicotiana tabacum
Nitab4.5_0005621g0100 Nicotiana tabacum
Nitab4.5_0013479g0020 Nicotiana tabacum
Nn2g11375 Nelumbo nucifera
Oeu026139.1 Olea europaea
Oeu040430.1 Olea europaea
Os05g0490000 Oryza sativa ssp. japonica
Peaxi162Scf00691g00055 Petunia axillaris
Peaxi162Scf00916g00115 Petunia axillaris
Peaxi162Scf00916g00131 Petunia axillaris
PGR031G2108 Punica granatum
PGSC0003DMG400013918 Solanum tuberosum
Phvul.006G127600 Phaseolus vulgaris
Potri.001G125200 Populus trichocarpa
Pp3c2_10220 Physcomitrium patens
PRCOL_00003643 Prasinoderma coloniale
Prupe.6G362700 Prunus persica
Psat0s1379g0200 Pisum sativum
Psat1g166960 Pisum sativum
PSO133G0013 Papaver somniferum
PSO339G2657 Papaver somniferum
PSO541G5859 Papaver somniferum
QL03p046485 Quercus lobata
QL10p055615 Quercus lobata
QL10p055704 Quercus lobata
RcHm_v2.0_Chr3g0447651 Rosa chinensis
RhsimUnG0095000 Rhododendron simsii
Sabra01G0096300 Salix brachista
SalBow2G0175 Salvia bowleyana
Sc16g0010460 Simmondsia chinensis
Sed0018672 Sechium edule
SEGI_23235 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18986 Striga asiatica
SHI13708 Sapria himalayana
SMO118G0180 Selaginella moellendorffii
Solyc07g064350.3 Solanum lycopersicum
Sopen07g032510 Solanum pennellii
Sp3g21860 Schrenkiella parvula
TAR369G1103 Trochodendron aralioides
TAR623G1038 Trochodendron aralioides
THA.LOC104821618 Tarenaya hassleriana
Thecc.05G190100 Theobroma cacao
TPR.G26364 Trifolium pratense
TWI12G1283 Tripterygium wilfordii
unitig_46.g18493 Utricularia gibba
vmacro00813 Vaccinium macrocarpon
vmacro22819 Vaccinium macrocarpon
VMungo0540G1901 Vigna mungo
Zm00001eb227770 Zea mays

User provided reference genes

Program Settings