Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06350 Brassica napus
A04p26400 Brassica napus
Aa31LG10G6910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis
Actinidia07685 Actinidia chinensis
AL4G30440 Arabidopsis lyrata
Aqoxy4G00105 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea
AT2G34470 Arabidopsis thaliana
ATR0585G042 Amborella trichopoda
Atru.chr10.1272 Acer truncatum
AUR62027525 Chenopodium quinoa
AUR62030221 Chenopodium quinoa
AUR62030223 Chenopodium quinoa
BcaB06g28772 Brassica carinata
BcaC02g09191 Brassica carinata
BolC4t25559H Brassica oleracea
BolC4t25560H Brassica oleracea
BolC4t27848H Brassica oleracea
BraA04t16339Z Brassica rapa
BraA04t18144Z Brassica rapa
C04p39880 Brassica napus
C04p39890 Brassica napus
C04p63810 Brassica napus
CAN.G650.23 Capsicum annuum
CAN.G94.3 Capsicum annuum
CANSAT80G0786 Cannabis sativa
CARHR128550 Cardamine hirsuta
Carub.0004s1614 Capsella rubella
Ca_18267_v3 Cicer arietinum L.
CBR_g38955 Chara braunii
Cc09_g09370 Coffea canephora
CDE02G4127 Ceratophyllum demersum
Ciclev10016173m.g Citrus clementina
CiPaw.09G125500 Carya illinoinensis
ClCG03G007040 Citrullus lanatus
COL.COLO4_31094 Corchorus olitorius
Cpa.g.sc166.24 Carica papaya
CsaV3_1G032590 Cucumis sativus L.
CSS0037137 Camellia sinensis var. sinensis
DCAR_005122 Daucus carota
Dinv30725 Davidia involucrata
Dinv30726 Davidia involucrata
Dinv32271 Davidia involucrata
Duzib235G0716 Durio zibethinus
ECA232G4567 Erigeron canadensis
EL10Ac8g19740 Beta vulgaris
Eucgr.E02383 Eucalyptus grandis
Eucgr.E02408 Eucalyptus grandis
FAN02G0019 Fragaria x ananassa
FAN02G1132 Fragaria x ananassa
FAN08G0336 Fragaria x ananassa
FAN11G1575 Fragaria x ananassa
FAN16G2159 Fragaria x ananassa
FAN17G1884 Fragaria x ananassa
FAN21G0047 Fragaria x ananassa
FAN23G0273 Fragaria x ananassa
FAN25G0382 Fragaria x ananassa
FAN25G2810 Fragaria x ananassa
FvH4_3g05780 Fragaria vesca
Glyma.08G084800 Glycine max
Gohir.A10G039600 Gossypium hirsutum
Gohir.D10G040400 Gossypium hirsutum
Gorai.011G042600 Gossypium raimondii
GSVIVG01021429001 Vitis vinifera
HanXRQChr08g0230021 Helianthus annuus
Haze_05577 Corylus avellana
Haze_26810 Corylus avellana
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla
HPP92_010050 Vanilla planifolia
Hund21524 Selenicereus undatus
Lalb_Chr07g0188621 Lupinus albus
Lj1A1186G50 Lonicera japonica
Lsat_1_v5_gn_1_96721 Lactuca sativa
Manes.17G068800 Manihot esculenta
Mapoly0128s0016 Marchantia polymorpha
MBI07_g15285_MAGBIO Magnolia biondii
MBI07_g26370_MAGBIO Magnolia biondii
MCO04G141 Micromonas commoda
MD05G1285700 Malus domestica
MD10G1263700 Malus domestica
Medtr4g096770 Medicago truncatula
MELO3C002721.2 Cucumis melo
Migut.H01369 Erythranthe guttata
MSTRG.13250 Avicennia marina
MSTRG.14769 Avicennia marina
Nitab4.5_0001655g0090 Nicotiana tabacum
Nitab4.5_0005219g0060 Nicotiana tabacum
Nn3g20701 Nelumbo nucifera
Oeu030916.2 Olea europaea
Os05g0565200 Oryza sativa ssp. japonica
Peaxi162Scf00022g00310 Petunia axillaris
PGR042G3684 Punica granatum
PGSC0003DMG400008287 Solanum tuberosum
Phvul.002G193800 Phaseolus vulgaris
Potri.002G243500 Populus trichocarpa
Potri.002G243700 Populus trichocarpa
Pp3c24_19130 Physcomitrium patens
PRCOL_00002216 Prasinoderma coloniale
Prupe.4G079000 Prunus persica
Psat7g090160 Pisum sativum
PSO017G0333 Papaver somniferum
PSO017G6742 Papaver somniferum
PSO478G1410 Papaver somniferum
QL05p058825 Quercus lobata
QL05p058849 Quercus lobata
RcHm_v2.0_Chr5g0013721 Rosa chinensis
RcHm_v2.0_Chr5g0013731 Rosa chinensis
RcHm_v2.0_Chr5g0013741 Rosa chinensis
RcHm_v2.0_Chr5g0013751 Rosa chinensis
Rhsim07G0173200 Rhododendron simsii
Sabra02G0185400 Salix brachista
SalBow7G1512 Salvia bowleyana
Sc05g0006370 Simmondsia chinensis
Sed0010647 Sechium edule
SEGI_04817 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30642 Striga asiatica
SMO353G0068 Selaginella moellendorffii
Solyc02g070670.4 Solanum lycopersicum
Sopen02g019750 Solanum pennellii
Sp4g16740 Schrenkiella parvula
TAR627G0480 Trochodendron aralioides
THA.LOC104812667 Tarenaya hassleriana
Thecc.06G152400 Theobroma cacao
Thhalv10017058m.g Eutrema salsugineum
TPR.G4903 Trifolium pratense
TWI09G0986 Tripterygium wilfordii
TWI09G1196 Tripterygium wilfordii
TWI53G0431 Tripterygium wilfordii
unitig_32.g11441 Utricularia gibba
vmacro17882 Vaccinium macrocarpon
VMungo0251G2847 Vigna mungo
VMungo1309G0118 Vigna mungo
Zm00001eb343840 Zea mays

User provided reference genes

Program Settings