Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p04030 Brassica napus
Aa31LG10G4600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis
Actinidia17829 Actinidia chinensis
Actinidia27912 Actinidia chinensis
Actinidia27913 Actinidia chinensis
AL1G56340 Arabidopsis lyrata
Aqoxy5G01712 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea
AT1G49380 Arabidopsis thaliana
ATR0733G225 Amborella trichopoda
Atru.chr5.2933 Acer truncatum
AUR62011361 Chenopodium quinoa
AUR62016700 Chenopodium quinoa
AUR62026246 Chenopodium quinoa
BcaB04g17346 Brassica carinata
BcaC07g37058 Brassica carinata
BolC8t47226H Brassica oleracea
BraA08t32431Z Brassica rapa
C08p04230 Brassica napus
CAN.G1.51 Capsicum annuum
CAN.G322.106 Capsicum annuum
CANSAT25G3337 Cannabis sativa
CARHR039390 Cardamine hirsuta
Carub.0001s3855 Capsella rubella
Ca_20845_v3 Cicer arietinum L.
CBR_g46847 Chara braunii
Cc02_g17920 Coffea canephora
CDE01G0298 Ceratophyllum demersum
CDE02G0286 Ceratophyllum demersum
Ciclev10028141m.g Citrus clementina
CiPaw.06G137900 Carya illinoinensis
ClCG02G005320 Citrullus lanatus
COL.COLO4_32466 Corchorus olitorius
Cpa.g.sc62.105 Carica papaya
Cre13.g575000 Chlamydomonas reinhardtii
CsaV3_7G010230 Cucumis sativus L.
CSS0002132 Camellia sinensis var. sinensis
DCAR_022094 Daucus carota
Dinv23558 Davidia involucrata
Duzib052G0462 Durio zibethinus
Duzib132G0001 Durio zibethinus
ECA248G1707 Erigeron canadensis
EL10Ac9g21763 Beta vulgaris
Eucgr.G00476 Eucalyptus grandis
FAN15G0466 Fragaria x ananassa
FAN19G2312 Fragaria x ananassa
FAN20G0809 Fragaria x ananassa
FAN24G3015 Fragaria x ananassa
FvH4_1g29190 Fragaria vesca
FvH4_2g07950 Fragaria vesca
Glyma.11G120800 Glycine max
Glyma.12G045850 Glycine max
Glyma.12G045901 Glycine max
Gohir.A03G180100 Gossypium hirsutum
Gohir.D02G203009 Gossypium hirsutum
Gorai.005G229000 Gossypium raimondii
GSVIVG01031911001 Vitis vinifera
HanXRQChr01g0011551 Helianthus annuus
Haze_02421 Corylus avellana
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla
HPP92_018386 Vanilla planifolia
Hund06219 Selenicereus undatus
Lalb_Chr01g0002751 Lupinus albus
Lalb_Chr03g0025831 Lupinus albus
Lj3g0005966 Lotus japonicus
Lj5C201T4 Lonicera japonica
Lj5g0025918 Lotus japonicus
Lsat_1_v5_gn_5_173381 Lactuca sativa
Manes.15G148000 Manihot esculenta
Mapoly0160s0024 Marchantia polymorpha
MBI16_g10988_MAGBIO Magnolia biondii
MCO11G018 Micromonas commoda
MD05G1072000 Malus domestica
MD10G1082600 Malus domestica
Medtr4g069080 Medicago truncatula
MELO3C018406.2 Cucumis melo
Migut.B00270 Erythranthe guttata
MSTRG.20107 Avicennia marina
Nitab4.5_0001361g0160 Nicotiana tabacum
Nitab4.5_0004280g0110 Nicotiana tabacum
Nitab4.5_0004287g0050 Nicotiana tabacum
Nitab4.5_0005152g0070 Nicotiana tabacum
Nn1g05118 Nelumbo nucifera
Oeu021892.1 Olea europaea
Os03g0769600 Oryza sativa ssp. japonica
Peaxi162Scf00003g01334 Petunia axillaris
Peaxi162Scf00016g00106 Petunia axillaris
PGR042G3676 Punica granatum
PGSC0003DMG400003326 Solanum tuberosum
PGSC0003DMG400005550 Solanum tuberosum
PGSC0003DMG400019020 Solanum tuberosum
PGSC0003DMG400025182 Solanum tuberosum
Phvul.011G047800 Phaseolus vulgaris
Potri.009G111692 Populus trichocarpa
Potri.T124704 Populus trichocarpa
Pp3c5_6360 Physcomitrium patens
PRCOL_00003752 Prasinoderma coloniale
Prupe.8G105700 Prunus persica
Psat7g185160 Pisum sativum
PSO170G4048 Papaver somniferum
PSO700G0051 Papaver somniferum
QL07p047674 Quercus lobata
QL07p047677 Quercus lobata
QL11p041469 Quercus lobata
QL11p041571 Quercus lobata
QL11p041915 Quercus lobata
QL11p042284 Quercus lobata
RcHm_v2.0_Chr6g0262411 Rosa chinensis
Rhsim05G0076900 Rhododendron simsii
Sabra09G0085300 Salix brachista
SalBow6G0484 Salvia bowleyana
Sc18g0004720 Simmondsia chinensis
Sed0025253 Sechium edule
SEGI_20066 Sequoiadendron giganteum
SEGI_30892 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20572 Striga asiatica
SMO172G0143 Selaginella moellendorffii
Solyc01g109330.3 Solanum lycopersicum
Solyc10g051200.2 Solanum lycopersicum
Sopen01g051520 Solanum pennellii
Sopen10g022910 Solanum pennellii
Sp1g36220 Schrenkiella parvula
TAR381G0424 Trochodendron aralioides
TAR381G0857 Trochodendron aralioides
THA.LOC104800072 Tarenaya hassleriana
Thecc.02G121600 Theobroma cacao
Thhalv10011363m.g Eutrema salsugineum
TPR.G28056 Trifolium pratense
unitig_0.g67 Utricularia gibba
vmacro19441 Vaccinium macrocarpon
VMungo1127G1847 Vigna mungo
Zm00001eb058790 Zea mays

User provided reference genes

Program Settings