Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16820 Brassica napus
A07p15460 Brassica napus
Aa31LG7G4990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis
Actinidia15518 Actinidia chinensis
Actinidia17068 Actinidia chinensis
Ah.00g001120 Amaranthus hybridus
AL1G33850 Arabidopsis lyrata
Aqoxy6G01560 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea
AT1G20830 Arabidopsis thaliana
ATR0807G100 Amborella trichopoda
Atru.chr13.78 Acer truncatum
Atru.chr13.79 Acer truncatum
AUR62024105 Chenopodium quinoa
AUR62035160 Chenopodium quinoa
BcaB03g12849 Brassica carinata
BcaB03g14422 Brassica carinata
BcaB07g32077 Brassica carinata
BcaB07g32078 Brassica carinata
BcaC05g25986 Brassica carinata
BcaC07g39055 Brassica carinata
BolC5t30641H Brassica oleracea
BolC8t49668H Brassica oleracea
BraA06t24791Z Brassica rapa
C05p19380 Brassica napus
C08p20390 Brassica napus
CAN.G36.16 Capsicum annuum
CANSAT35G0891 Cannabis sativa
CARHR021260 Cardamine hirsuta
Carub.0001s2029 Capsella rubella
Ca_15390_v3 Cicer arietinum L.
Ca_29628_v3 Cicer arietinum L.
Cc10_g00320 Coffea canephora
CDE04G2669 Ceratophyllum demersum
CDE07G0022 Ceratophyllum demersum
Cfa014126 Carpinus fangiana
Ciclev10001686m.g Citrus clementina
CiPaw.07G134700 Carya illinoinensis
ClCG11G018940 Citrullus lanatus
COL.COLO4_07687 Corchorus olitorius
Cpa.g.c30366.3 Carica papaya
Cpa.g.c30633.1 Carica papaya
Cpa.g.c35203 Carica papaya
Cpa.g.c44851 Carica papaya
Cpa.g.sc26.110 Carica papaya
Cpa.g.sc26.148 Carica papaya
Cpa.g.sc26.149 Carica papaya
CsaV3_4G037540 Cucumis sativus L.
CSS0017080 Camellia sinensis var. sinensis
Dinv31977 Davidia involucrata
Duzib093G1432 Durio zibethinus
Duzib116G0237 Durio zibethinus
ECA238G0561 Erigeron canadensis
EL10Ac1g01884 Beta vulgaris
Eucgr.F03584 Eucalyptus grandis
FAN04G3045 Fragaria x ananassa
FAN08G0897 Fragaria x ananassa
FAN13G2028 Fragaria x ananassa
FAN18G0352 Fragaria x ananassa
FvH4_5g25940 Fragaria vesca
Glyma.04G015100 Glycine max
Glyma.06G015100 Glycine max
Gohir.A05G177700 Gossypium hirsutum
Gohir.D05G181100 Gossypium hirsutum
Gorai.009G186100 Gossypium raimondii
GSVIVG01013413001 Vitis vinifera
HanXRQChr06g0185301 Helianthus annuus
Haze_22847 Corylus avellana
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla
HPP92_022548 Vanilla planifolia
Hund05083 Selenicereus undatus
Lalb_Chr23g0265571 Lupinus albus
Lj1g0001697 Lotus japonicus
Lj4C5T14 Lonicera japonica
Lsat_1_v5_gn_2_2221 Lactuca sativa
Manes.05G126100 Manihot esculenta
Mapoly0022s0159 Marchantia polymorpha
MBI05_g08201_MAGBIO Magnolia biondii
MD06G1005200 Malus domestica
Medtr3g116050 Medicago truncatula
MELO3C017048.2 Cucumis melo
Migut.N02981 Erythranthe guttata
MSTRG.22087 Avicennia marina
Nitab4.5_0000486g0150 Nicotiana tabacum
Nitab4.5_0004637g0020 Nicotiana tabacum
Nn5g31025 Nelumbo nucifera
Oeu004544.1 Olea europaea
Oeu019899.1 Olea europaea
Oeu019902.1 Olea europaea
Os04g0584900 Oryza sativa ssp. japonica
Peaxi162Scf00632g00416 Petunia axillaris
PGSC0003DMG400000968 Solanum tuberosum
Phvul.009G007500 Phaseolus vulgaris
Potri.002G006300 Populus trichocarpa
Potri.005G255300 Populus trichocarpa
Pp3c15_5620 Physcomitrium patens
Pp3c9_6030 Physcomitrium patens
Prupe.5G006400 Prunus persica
Psat5g008680 Pisum sativum
PSO541G4707 Papaver somniferum
PSO675G3648 Papaver somniferum
QL02p015343 Quercus lobata
RcHm_v2.0_Chr4g0410601 Rosa chinensis
RcHm_v2.0_Chr7g0216471 Rosa chinensis
Rhsim06G0004000 Rhododendron simsii
Sabra05G0197900 Salix brachista
SalBow6G6969 Salvia bowleyana
Sc02g0009220 Simmondsia chinensis
Sed0012463 Sechium edule
SEGI_27803 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19632 Striga asiatica
SMO276G0054 Selaginella moellendorffii
Solyc08g042080.3 Solanum lycopersicum
Sopen08g012540 Solanum pennellii
Sp1g18530 Schrenkiella parvula
TAR188G0003 Trochodendron aralioides
TAR381G1666 Trochodendron aralioides
TAR625G0170 Trochodendron aralioides
THA.LOC104813742 Tarenaya hassleriana
Thecc.08G064200 Theobroma cacao
Thhalv10007995m.g Eutrema salsugineum
TPR.G38133 Trifolium pratense
TWI12G0719 Tripterygium wilfordii
TWI56G0384 Tripterygium wilfordii
unitig_22.g5745 Utricularia gibba
vmacro21777 Vaccinium macrocarpon
VMungo0331G1038 Vigna mungo
VMungo1080G0957 Vigna mungo
VMungo1127G1701 Vigna mungo
VMungo1309G2122 Vigna mungo
VMungo1383G2563 Vigna mungo
Zm00001eb072780 Zea mays
Zm00001eb428100 Zea mays

User provided reference genes

Program Settings