Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p50460 Brassica napus
Aa31LG10G12390 Aethionema arabicum
Actinidia09354 Actinidia chinensis
Ah.13g076290 Amaranthus hybridus
AL5G39150 Arabidopsis lyrata
Aqoxy7G01800 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4MAIX Arachis hypogaea
AT3G57570 Arabidopsis thaliana
ATR0605G192 Amborella trichopoda
Atru.chr1.1044 Acer truncatum
AUR62024408 Chenopodium quinoa
AUR62024409 Chenopodium quinoa
AUR62026001 Chenopodium quinoa
BcaC07g40361 Brassica carinata
BcaC07g40362 Brassica carinata
BolC4t25036H Brassica oleracea
BolC8t50918H Brassica oleracea
BraA09t40497Z Brassica rapa
C04p34840 Brassica napus
C08p33160 Brassica napus
CANSAT80G2574 Cannabis sativa
CARHR167800 Cardamine hirsuta
CARHR167810 Cardamine hirsuta
Carub.0005s2441 Capsella rubella
Ca_08477_v3 Cicer arietinum L.
CBR_g41427 Chara braunii
CBR_g41434 Chara braunii
Cc06_g17000 Coffea canephora
CDE10G0401 Ceratophyllum demersum
Cfa016851 Carpinus fangiana
Ciclev10004212m.g Citrus clementina
CiPaw.09G035700 Carya illinoinensis
ClCG04G000840 Citrullus lanatus
ClCG04G000850 Citrullus lanatus
COL.COLO4_28164 Corchorus olitorius
COL.COLO4_28165 Corchorus olitorius
Cpa.g.sc92.19 Carica papaya
Cpa.g.sc92.20 Carica papaya
CsaV3_4G031330 Cucumis sativus L.
CSS0036262 Camellia sinensis var. sinensis
DCAR_009055 Daucus carota
Dinv01671 Davidia involucrata
Dinv24132 Davidia involucrata
Duzib093G0922 Durio zibethinus
ECA248G2859 Erigeron canadensis
EL10Ac3g07027 Beta vulgaris
Eucgr.A02387 Eucalyptus grandis
FAN01G1916 Fragaria x ananassa
FAN04G1389 Fragaria x ananassa
FAN06G4049 Fragaria x ananassa
FAN10G0844 Fragaria x ananassa
FAN15G2563 Fragaria x ananassa
FAN20G1206 Fragaria x ananassa
FAN24G0778 Fragaria x ananassa
FAN26G1840 Fragaria x ananassa
FAN27G3244 Fragaria x ananassa
FvH4_2g02670 Fragaria vesca
FvH4_7g07941 Fragaria vesca
FvH4_7g07942 Fragaria vesca
FvH4_7g07943 Fragaria vesca
Glyma.19G141900 Glycine max
Gohir.A01G196500 Gossypium hirsutum
Gohir.D01G186800 Gossypium hirsutum
Gorai.002G230200 Gossypium raimondii
GSVIVG01033319001 Vitis vinifera
HanXRQChr13g0390691 Helianthus annuus
Haze_19901 Corylus avellana
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla
Hma1.2p1_0247F.1_g101870 Hydrangea macrophylla
Lalb_Chr20g0110821 Lupinus albus
Lj1g0025810 Lotus japonicus
Lj2A380T68 Lonicera japonica
Lj2C380T2 Lonicera japonica
Lsat_1_v5_gn_5_162580 Lactuca sativa
Lsat_1_v5_gn_7_104380 Lactuca sativa
Manes.09G026800 Manihot esculenta
Mapoly0169s0013 Marchantia polymorpha
MCO09G818 Micromonas commoda
MD05G1111300 Malus domestica
Medtr7g092130 Medicago truncatula
MELO3C009042.2 Cucumis melo
Migut.J01777 Erythranthe guttata
MSTRG.6443 Avicennia marina
Nitab4.5_0002510g0050 Nicotiana tabacum
Nitab4.5_0005201g0010 Nicotiana tabacum
Nitab4.5_0010669g0020 Nicotiana tabacum
Nitab4.5_0010669g0030 Nicotiana tabacum
Nn7g36123 Nelumbo nucifera
Oeu018003.1 Olea europaea
Peaxi162Scf00650g00112 Petunia axillaris
PGR004G1983 Punica granatum
PGSC0003DMG401011958 Solanum tuberosum
PGSC0003DMG402011958 Solanum tuberosum
Phvul.001G135900 Phaseolus vulgaris
Potri.006G054100 Populus trichocarpa
Pp3c13_4080 Physcomitrium patens
Prupe.8G156400 Prunus persica
Psat3g071760 Pisum sativum
PSO782G5466 Papaver somniferum
QL07p021385 Quercus lobata
RcHm_v2.0_Chr6g0247071 Rosa chinensis
RcHm_v2.0_Chr7g0177161 Rosa chinensis
Rhsim03G0014800 Rhododendron simsii
Rhsim03G0016100 Rhododendron simsii
Rhsim03G0016400 Rhododendron simsii
Rhsim03G0016500 Rhododendron simsii
Rhsim03G0016600 Rhododendron simsii
Rhsim03G0017400 Rhododendron simsii
Rhsim03G0097300 Rhododendron simsii
Rhsim05G0135200 Rhododendron simsii
Sabra06G0038400 Salix brachista
SalBow4G0785 Salvia bowleyana
SalBow6G5243 Salvia bowleyana
Sc25g0005260 Simmondsia chinensis
Sed0005844 Sechium edule
SEGI_00323 Sequoiadendron giganteum
SEGI_21308 Sequoiadendron giganteum
SEGI_36353 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23097 Striga asiatica
SMO356G0176 Selaginella moellendorffii
Solyc03g063700.1 Solanum lycopersicum
Sp5g05020 Schrenkiella parvula
TAR633G2044 Trochodendron aralioides
THA.LOC104802271 Tarenaya hassleriana
Thecc.05G160700 Theobroma cacao
Thecc.05G160900 Theobroma cacao
Thecc.05G161000 Theobroma cacao
Thhalv10005777m.g Eutrema salsugineum
TPR.G3825 Trifolium pratense
TWI53G1199 Tripterygium wilfordii
vmacro07877 Vaccinium macrocarpon
vmacro07878 Vaccinium macrocarpon
vmacro22370 Vaccinium macrocarpon
VMungo1383G1829 Vigna mungo

User provided reference genes

Program Settings