Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36530 Brassica napus
A06p39970 Brassica napus
A07p19920 Brassica napus
Aa31LG2G3970 Aethionema arabicum
Aa31LG9G16660 Aethionema arabicum
Actinidia01981 Actinidia chinensis
Actinidia07818 Actinidia chinensis
Ah.10g032010 Amaranthus hybridus
AL3G46340 Arabidopsis lyrata
AL3G48400 Arabidopsis lyrata
AL5G19350 Arabidopsis lyrata
Aqoxy3G03578 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea
AT3G29310 Arabidopsis thaliana
ATR0064G019 Amborella trichopoda
Atru.chr8.406 Acer truncatum
AUR62018163 Chenopodium quinoa
AUR62042434 Chenopodium quinoa
BcaB02g07987 Brassica carinata
BcaB07g30084 Brassica carinata
BcaC03g17571 Brassica carinata
BcaC06g30873 Brassica carinata
BcaC06g33686 Brassica carinata
BcaC08g44413 Brassica carinata
BolC2t11608H Brassica oleracea
BolC6t37063H Brassica oleracea
BolC7t44342H Brassica oleracea
BraA02t08649Z Brassica rapa
BraA06t26912Z Brassica rapa
C02p55500 Brassica napus
C06p18500 Brassica napus
C07p38200 Brassica napus
CAN.G206.210 Capsicum annuum
CAN.G206.216 Capsicum annuum
CANSAT64G1937 Cannabis sativa
CARHR154030 Cardamine hirsuta
Carub.0005s0802 Capsella rubella
Ca_06819_v3 Cicer arietinum L.
Cc07_g04040 Coffea canephora
Cfa007637 Carpinus fangiana
Ciclev10011685m.g Citrus clementina
CiPaw.04G057600 Carya illinoinensis
ClCG11G004670 Citrullus lanatus
COL.COLO4_03731 Corchorus olitorius
Cpa.g.sc14.156 Carica papaya
CsaV3_5G038440 Cucumis sativus L.
CSS0045690 Camellia sinensis var. sinensis
DCAR_011051 Daucus carota
Dinv34961 Davidia involucrata
Duzib147G0411 Durio zibethinus
Duzib187G0917 Durio zibethinus
ECA246G0940 Erigeron canadensis
EL10Ac2g03101 Beta vulgaris
Eucgr.I01977 Eucalyptus grandis
FAN02G2871 Fragaria x ananassa
FAN05G5426 Fragaria x ananassa
FAN09G1437 Fragaria x ananassa
FAN14G2617 Fragaria x ananassa
FvH4_6g47270 Fragaria vesca
Glyma.08G242700 Glycine max
Glyma.18G264900 Glycine max
Gohir.A09G010900 Gossypium hirsutum
Gohir.D09G010000 Gossypium hirsutum
Gorai.006G011600 Gossypium raimondii
GSVIVG01011503001 Vitis vinifera
HanXRQChr15g0473071 Helianthus annuus
Haze_14452 Corylus avellana
Haze_14462 Corylus avellana
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla
HPP92_019480 Vanilla planifolia
Hund13162 Selenicereus undatus
Hund15554 Selenicereus undatus
Lalb_Chr17g0337061 Lupinus albus
Lj1g0027832 Lotus japonicus
Lj4P116T76 Lonicera japonica
Lsat_1_v5_gn_3_98801 Lactuca sativa
Manes.01G098200 Manihot esculenta
Manes.02G052100 Manihot esculenta
MD00G1156300 Malus domestica
MD09G1062500 Malus domestica
Medtr7g012940 Medicago truncatula
MELO3C022025.2 Cucumis melo
Migut.K01286 Erythranthe guttata
Migut.K01288 Erythranthe guttata
Nitab4.5_0000565g0150 Nicotiana tabacum
Nitab4.5_0008213g0040 Nicotiana tabacum
Nn4g23370 Nelumbo nucifera
Oeu000861.1 Olea europaea
Oeu025712.1 Olea europaea
Oeu033388.1 Olea europaea
Os05g0512400 Oryza sativa ssp. japonica
Peaxi162Scf00166g00643 Petunia axillaris
PGR004G2722 Punica granatum
PGSC0003DMG400001447 Solanum tuberosum
Phvul.008G035100 Phaseolus vulgaris
Potri.004G124301 Populus trichocarpa
Potri.017G091100 Populus trichocarpa
Prupe.3G257800 Prunus persica
Psat3g200880 Pisum sativum
PSO017G2516 Papaver somniferum
PSO478G1813 Papaver somniferum
QL02p039943 Quercus lobata
RcHm_v2.0_Chr2g0166341 Rosa chinensis
Rhsim08G0074100 Rhododendron simsii
Sabra17G0080200 Salix brachista
SalBow2G0023 Salvia bowleyana
SalBow2G0426 Salvia bowleyana
SalBow3G1747 Salvia bowleyana
SalBow6G3771 Salvia bowleyana
SalBow7G3425 Salvia bowleyana
SalBow8G0266 Salvia bowleyana
Sc11g0004700 Simmondsia chinensis
Sed0007565 Sechium edule
SGA_v2.0_scaffold4G02406 Striga asiatica
SGA_v2.0_scaffold52G19180 Striga asiatica
Solyc02g088660.4 Solanum lycopersicum
Sopen02g033380 Solanum pennellii
Sp2g17910 Schrenkiella parvula
Sp7g02640 Schrenkiella parvula
Sp7g02650 Schrenkiella parvula
TAR371G0637 Trochodendron aralioides
TAR629G0087 Trochodendron aralioides
THA.LOC104805502 Tarenaya hassleriana
THA.LOC104823892 Tarenaya hassleriana
Thecc.04G091900 Theobroma cacao
Thhalv10003979m.g Eutrema salsugineum
Thhalv10027716m.g Eutrema salsugineum
TPR.G33463 Trifolium pratense
TWI32G0095 Tripterygium wilfordii
TWI34G1348 Tripterygium wilfordii
TWI60G1009 Tripterygium wilfordii
vmacro18155 Vaccinium macrocarpon
VMungo1383G0251 Vigna mungo
Zm00001eb352990 Zea mays

User provided reference genes

Program Settings