Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20950 Brassica napus
Aa31sc78G80 Aethionema arabicum
Actinidia13818 Actinidia chinensis
Actinidia29170 Actinidia chinensis
AL2G12110 Arabidopsis lyrata
AL4G34860 Arabidopsis lyrata
AL5G19320 Arabidopsis lyrata
AL7G37210 Arabidopsis lyrata
Aqoxy7G03344 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4YLV1I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0LHRU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBKP7Q Arachis hypogaea
AT2G37920 Arabidopsis thaliana
ATR1089G112 Amborella trichopoda
Atru.chr8.2087 Acer truncatum
AUR62027483 Chenopodium quinoa
AUR62033707 Chenopodium quinoa
AUR62036813 Chenopodium quinoa
BcaB01g03740 Brassica carinata
BcaC01g05584 Brassica carinata
BolC3t14857H Brassica oleracea
BraA03t11334Z Brassica rapa
C03p24610 Brassica napus
CAN.G697.5 Capsicum annuum
CAN.G697.6 Capsicum annuum
CANSAT35G1568 Cannabis sativa
CARHR132460 Cardamine hirsuta
Carub.0004s1982 Capsella rubella
Ca_27721_v3 Cicer arietinum L.
Cc06_g02100 Coffea canephora
CDE04G3753 Ceratophyllum demersum
CDE12G0309 Ceratophyllum demersum
Cfa017304 Carpinus fangiana
Ciclev10012647m.g Citrus clementina
CiPaw.10G149200 Carya illinoinensis
ClCG04G007670 Citrullus lanatus
COL.COLO4_14700 Corchorus olitorius
COL.COLO4_14702 Corchorus olitorius
Cpa.g.sc1380.1 Carica papaya
CsaV3_4G025560 Cucumis sativus L.
CSS0015468 Camellia sinensis var. sinensis
DCAR_012138 Daucus carota
DCAR_017462 Daucus carota
Dinv22029 Davidia involucrata
Dinv37119 Davidia involucrata
Duzib093G1880 Durio zibethinus
Duzib106G0627 Durio zibethinus
ECA247G1035 Erigeron canadensis
EL10Ac7g16173 Beta vulgaris
Eucgr.B02727 Eucalyptus grandis
FAN02G3647 Fragaria x ananassa
FAN05G0996 Fragaria x ananassa
FAN09G3204 Fragaria x ananassa
FAN14G3704 Fragaria x ananassa
FvH4_6g12760 Fragaria vesca
Glyma.03G100000 Glycine max
Glyma.05G205533 Glycine max
Glyma.07G122500 Glycine max
Gohir.A09G152600 Gossypium hirsutum
Gohir.D09G148300 Gossypium hirsutum
Gorai.006G169300 Gossypium raimondii
HanXRQChr04g0124491 Helianthus annuus
Haze_20879 Corylus avellana
Haze_20888 Corylus avellana
Hma1.2p1_0671F.1_g200540 Hydrangea macrophylla
HPP92_005607 Vanilla planifolia
HPP92_028126 Vanilla planifolia
Lalb_Chr12g0210271 Lupinus albus
Lalb_Chr12g0210311 Lupinus albus
Lj2C65T6 Lonicera japonica
Lj3g0017501 Lotus japonicus
Lsat_1_v5_gn_8_84160 Lactuca sativa
Manes.02G024500 Manihot esculenta
Manes.08G082000 Manihot esculenta
MBI06_g17069_MAGBIO Magnolia biondii
MD04G1138600 Malus domestica
MD12G1154300 Malus domestica
Medtr0874s0010 Medicago truncatula
MELO3C003181.2 Cucumis melo
Migut.J00266 Erythranthe guttata
MSTRG.19053 Avicennia marina
MSTRG.5629 Avicennia marina
Nitab4.5_0000362g0180 Nicotiana tabacum
Nitab4.5_0010208g0010 Nicotiana tabacum
Nn2g13523 Nelumbo nucifera
Oeu001838.1 Olea europaea
Os02g0564300 Oryza sativa ssp. japonica
Peaxi162Scf00975g00005 Petunia axillaris
PGR004G2501 Punica granatum
PGSC0003DMG400024269 Solanum tuberosum
Phvul.010G039900 Phaseolus vulgaris
Potri.006G092100 Populus trichocarpa
Potri.016G103600 Populus trichocarpa
Prupe.6G264200 Prunus persica
Psat4g216560 Pisum sativum
PSO170G4411 Papaver somniferum
PSO700G0359 Papaver somniferum
QL07p028358 Quercus lobata
QL11p022898 Quercus lobata
RcHm_v2.0_Chr2g0112341 Rosa chinensis
RcHm_v2.0_Chr3g0464731 Rosa chinensis
RcHm_v2.0_Chr4g0392921 Rosa chinensis
Rhsim05G0199400 Rhododendron simsii
Sabra06G0069700 Salix brachista
Sabra16G0103400 Salix brachista
SalBow5G2115 Salvia bowleyana
Sc01g0004810 Simmondsia chinensis
Sed0002606 Sechium edule
SEGI_02447 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35108 Striga asiatica
SGA_v2.0_scaffold85G26813 Striga asiatica
SMO308G0022 Selaginella moellendorffii
SMO364G0367 Selaginella moellendorffii
Solyc09g011410.4 Solanum lycopersicum
Sopen09g006140 Solanum pennellii
Sp4g20220 Schrenkiella parvula
TAR365G0212 Trochodendron aralioides
TAR633G0733 Trochodendron aralioides
TAR636G0567 Trochodendron aralioides
THA.LOC104823402 Tarenaya hassleriana
Thecc.05G029500 Theobroma cacao
Thhalv10000504m.g Eutrema salsugineum
Thhalv10005406m.g Eutrema salsugineum
Thhalv10010999m.g Eutrema salsugineum
Thhalv10017070m.g Eutrema salsugineum
Thhalv10023045m.g Eutrema salsugineum
Thhalv10024002m.g Eutrema salsugineum
Thhalv10024146m.g Eutrema salsugineum
Thhalv10027476m.g Eutrema salsugineum
TPR.G17369 Trifolium pratense
TWI74G0123 Tripterygium wilfordii
unitig_749.g14179 Utricularia gibba
vmacro20194 Vaccinium macrocarpon
VMungo0331G1050 Vigna mungo
VMungo1383G1565 Vigna mungo
Zm00001eb244220 Zea mays

User provided reference genes

Program Settings