Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15550 Brassica napus
A02p15780 Brassica napus
Aa31LG4G11610 Aethionema arabicum
Actinidia13393 Actinidia chinensis
Actinidia13394 Actinidia chinensis
Actinidia16166 Actinidia chinensis
Ah.03g138910 Amaranthus hybridus
AL2G28030 Arabidopsis lyrata
AL2G28380 Arabidopsis lyrata
Aqoxy3G03635 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C9N2WV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ULTQ00 Arachis hypogaea
AT1G68980 Arabidopsis thaliana
AT1G69290 Arabidopsis thaliana
ATR0064G080 Amborella trichopoda
Atru.chr11.1629 Acer truncatum
AUR62003098 Chenopodium quinoa
AUR62007916 Chenopodium quinoa
BcaB05g24437 Brassica carinata
BcaB08g37461 Brassica carinata
BcaB08g37462 Brassica carinata
BcaC03g15023 Brassica carinata
BcaC03g15067 Brassica carinata
BcaC06g33362 Brassica carinata
BcaC07g41670 Brassica carinata
BolC2t08638H Brassica oleracea
BolC2t08693H Brassica oleracea
BolC7t45189H Brassica oleracea
BraA02t06616Z Brassica rapa
BraA02t06639Z Brassica rapa
C02p25690 Brassica napus
C02p26260 Brassica napus
C08p46850 Brassica napus
CAN.G756.36 Capsicum annuum
CANSAT64G1878 Cannabis sativa
CARHR061860 Cardamine hirsuta
CARHR062160 Cardamine hirsuta
Carub.0002s1560 Capsella rubella
Carub.0002s1588 Capsella rubella
Ca_02760_v3 Cicer arietinum L.
Ca_26530_v3 Cicer arietinum L.
Ca_26840_v3 Cicer arietinum L.
Cc11_g11990 Coffea canephora
CDE05G2142 Ceratophyllum demersum
Cfa008881 Carpinus fangiana
Ciclev10033305m.g Citrus clementina
CiPaw.05G125300 Carya illinoinensis
ClCG05G023710 Citrullus lanatus
COL.COLO4_27885 Corchorus olitorius
Cpa.g.sc1.124 Carica papaya
CsaV3_5G033320 Cucumis sativus L.
CSS0014081 Camellia sinensis var. sinensis
DCAR_007196 Daucus carota
Dinv16732 Davidia involucrata
Dinv16733 Davidia involucrata
Duzib251G0100 Durio zibethinus
ECA233G5550 Erigeron canadensis
EL10Ac6g14997 Beta vulgaris
Eucgr.B03150 Eucalyptus grandis
FAN04G2429 Fragaria x ananassa
FAN07G0248 Fragaria x ananassa
FAN12G1642 Fragaria x ananassa
FAN17G2637 Fragaria x ananassa
FAN18G4574 Fragaria x ananassa
FAN22G1777 Fragaria x ananassa
FvH4_1g02410 Fragaria vesca
FvH4_4g30080 Fragaria vesca
Glyma.02G116700 Glycine max
Gohir.A13G082600 Gossypium hirsutum
Gohir.D13G082200 Gossypium hirsutum
Gorai.013G094000 Gossypium raimondii
GSVIVG01012219001 Vitis vinifera
HanXRQChr08g0211761 Helianthus annuus
Haze_11910 Corylus avellana
Hma1.2p1_0566F.1_g179770 Hydrangea macrophylla
HPP92_007747 Vanilla planifolia
HPP92_007826 Vanilla planifolia
HPP92_007827 Vanilla planifolia
HPP92_007828 Vanilla planifolia
Lalb_Chr10g0098851 Lupinus albus
Lj2g0007336 Lotus japonicus
Lj5C707G2 Lonicera japonica
Lj6P779T31 Lonicera japonica
Lsat_1_v5_gn_8_46300 Lactuca sativa
Manes.01G027600 Manihot esculenta
MBI19_g16673_MAGBIO Magnolia biondii
MD13G1062900 Malus domestica
MD16G1061200 Malus domestica
Medtr5g044930 Medicago truncatula
Medtr5g045620 Medicago truncatula
Medtr5g459290 Medicago truncatula
MELO3C012153.2 Cucumis melo
Migut.L01191 Erythranthe guttata
MSTRG.753 Avicennia marina
Nitab4.5_0000563g0130 Nicotiana tabacum
Nitab4.5_0002341g0050 Nicotiana tabacum
Nn4g23420 Nelumbo nucifera
Oeu048142.1 Olea europaea
Os01g0788900 Oryza sativa ssp. japonica
Peaxi162Scf00793g00314 Petunia axillaris
PGR102G0141 Punica granatum
PGSC0003DMG400001725 Solanum tuberosum
Phvul.003G042400 Phaseolus vulgaris
Potri.008G095800 Populus trichocarpa
Prupe.1G286800 Prunus persica
Psat0s1923g0040 Pisum sativum
PSO541G5955 Papaver somniferum
QL12p030791 Quercus lobata
RcHm_v2.0_Chr4g0438351 Rosa chinensis
RcHm_v2.0_Chr5g0081051 Rosa chinensis
Rhsim09G0127400 Rhododendron simsii
SalBow2G2647 Salvia bowleyana
Sc04g0007590 Simmondsia chinensis
Sed0000601 Sechium edule
SEGI_18082 Sequoiadendron giganteum
SEGI_29165 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07790 Striga asiatica
SGA_v2.0_scaffold36G14458 Striga asiatica
SHI21451 Sapria himalayana
SMO172G0102 Selaginella moellendorffii
Solyc01g088750.3 Solanum lycopersicum
Sopen01g035590 Solanum pennellii
Sp5g24100 Schrenkiella parvula
Sp5g24350 Schrenkiella parvula
TAR622G0768 Trochodendron aralioides
THA.LOC104808534 Tarenaya hassleriana
Thecc.02G330500 Theobroma cacao
Thhalv10018238m.g Eutrema salsugineum
Thhalv10018264m.g Eutrema salsugineum
TPR.G23743 Trifolium pratense
TWI31G0688 Tripterygium wilfordii
unitig_578.g16579 Utricularia gibba
vmacro10424 Vaccinium macrocarpon
VMungo1215G2348 Vigna mungo
Zm00001eb151120 Zea mays
Zm00001eb386860 Zea mays

User provided reference genes

Program Settings