Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34030 Brassica napus
A05p05770 Brassica napus
Aa31LG1G27230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2500 Anthoceros agrestis
Actinidia12718 Actinidia chinensis
Actinidia33435 Actinidia chinensis
Ah.05g176310 Amaranthus hybridus
AL4G44970 Arabidopsis lyrata
Aqoxy7G00396 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5VQ11A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8YXW0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IAYA85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P882K7 Arachis hypogaea
AT2G45770 Arabidopsis thaliana
ATR0757G056 Amborella trichopoda
Atru.chr5.425 Acer truncatum
AUR62004305 Chenopodium quinoa
AUR62022755 Chenopodium quinoa
BcaB02g09007 Brassica carinata
BcaB02g09010 Brassica carinata
BcaC02g07052 Brassica carinata
BcaC02g07053 Brassica carinata
BcaC02g12182 Brassica carinata
BolC4t22292H Brassica oleracea
BolC4t28681H Brassica oleracea
BraA04t18864Z Brassica rapa
BraA05t19543Z Brassica rapa
C04p06710 Brassica napus
C04p71830 Brassica napus
CAN.G170.14 Capsicum annuum
CANSAT56G4288 Cannabis sativa
Carub.0004s2848 Capsella rubella
Ca_25785_v3 Cicer arietinum L.
CBR_g45388 Chara braunii
Cc00_g12130 Coffea canephora
CDE02G1367 Ceratophyllum demersum
CDE11G0267 Ceratophyllum demersum
Cfa004204 Carpinus fangiana
Ciclev10020663m.g Citrus clementina
CiPaw.02G026700 Carya illinoinensis
CiPaw.02G027000 Carya illinoinensis
CiPaw.02G027100 Carya illinoinensis
ClCG05G001760 Citrullus lanatus
COL.COLO4_12606 Corchorus olitorius
Cpa.g.sc18.211 Carica papaya
CsaV3_3G009150 Cucumis sativus L.
CSS0006849 Camellia sinensis var. sinensis
CSS0029823 Camellia sinensis var. sinensis
DCAR_025148 Daucus carota
Dinv43773 Davidia involucrata
Duzib138G1914 Durio zibethinus
ECA240G1317 Erigeron canadensis
EL10Ac1g00515 Beta vulgaris
Eucgr.E00194 Eucalyptus grandis
FAN01G0806 Fragaria x ananassa
FAN03G2921 Fragaria x ananassa
FAN06G1057 Fragaria x ananassa
FAN06G2859 Fragaria x ananassa
FAN10G2668 Fragaria x ananassa
FAN10G4172 Fragaria x ananassa
FAN23G0404 Fragaria x ananassa
FvH4_7g13420 Fragaria vesca
Glyma.03G015600 Glycine max
Glyma.07G075550 Glycine max
Glyma.07G075900 Glycine max
Gohir.A11G086300 Gossypium hirsutum
Gohir.D11G090500 Gossypium hirsutum
Gorai.007G096500 Gossypium raimondii
GSVIVG01027497001 Vitis vinifera
HanXRQChr05g0138171 Helianthus annuus
HanXRQChr12g0380101 Helianthus annuus
HanXRQChr13g0426231 Helianthus annuus
Haze_15205 Corylus avellana
Hma1.2p1_0001F.1_g001780 Hydrangea macrophylla
HPP92_004951 Vanilla planifolia
Hund27313 Selenicereus undatus
Lalb_Chr10g0097331 Lupinus albus
Lj3g0023098 Lotus japonicus
Lj7A517T50 Lonicera japonica
Lsat_1_v5_gn_3_135801 Lactuca sativa
Manes.01G260600 Manihot esculenta
Manes.05G038700 Manihot esculenta
Mapoly0097s0055 Marchantia polymorpha
MBI03_g34068_MAGBIO Magnolia biondii
MBI04_g04729_MAGBIO Magnolia biondii
MD01G1049200 Malus domestica
MD07G1126100 Malus domestica
MD07G1126200 Malus domestica
Medtr8g032340 Medicago truncatula
Medtr8g032480 Medicago truncatula
MELO3C006136.2 Cucumis melo
Migut.N01423 Erythranthe guttata
MSTRG.4872 Avicennia marina
Nitab4.5_0005423g0010 Nicotiana tabacum
Nitab4.5_0006421g0070 Nicotiana tabacum
Nn6g34198 Nelumbo nucifera
Oeu014688.2 Olea europaea
Os01g0958100 Oryza sativa ssp. japonica
PGR042G1999 Punica granatum
PGSC0003DMG400027773 Solanum tuberosum
Phvul.010G093600 Phaseolus vulgaris
Potri.002G155400 Populus trichocarpa
Potri.014G078800 Populus trichocarpa
Pp3c17_14730 Physcomitrium patens
Prupe.2G157700 Prunus persica
Prupe.2G158000 Prunus persica
Psat4g153600 Pisum sativum
PSO782G3686 Papaver somniferum
QL08p050136 Quercus lobata
RcHm_v2.0_Chr1g0352781 Rosa chinensis
RcHm_v2.0_Chr1g0352811 Rosa chinensis
Rhsim01G0153000 Rhododendron simsii
Sabra02G0123300 Salix brachista
Sabra14G0057000 Salix brachista
SalBow5G2510 Salvia bowleyana
SalBow5G4035 Salvia bowleyana
Sc23g0003160 Simmondsia chinensis
Sed0000776 Sechium edule
Sed0002697 Sechium edule
SEGI_03430 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05652 Striga asiatica
SMO364G0299 Selaginella moellendorffii
Solyc01g091580.3 Solanum lycopersicum
Sopen01g037350 Solanum pennellii
Sp4g27850 Schrenkiella parvula
TAR374G0147 Trochodendron aralioides
THA.LOC104817279 Tarenaya hassleriana
Thecc.01G366000 Theobroma cacao
Thhalv10001508m.g Eutrema salsugineum
TPR.G5720 Trifolium pratense
TPR.G9825 Trifolium pratense
TWI59G0155 Tripterygium wilfordii
unitig_0.g2766 Utricularia gibba
vmacro20960 Vaccinium macrocarpon
VMungo0331G0777 Vigna mungo
Zm00001eb140490 Zea mays

User provided reference genes

Program Settings