Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37460 Brassica napus
A10p01770 Brassica napus
Aa31LG1G9380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2719 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1507 Anthoceros agrestis
Actinidia21118 Actinidia chinensis
Actinidia24899 Actinidia chinensis
Ah.08g211290 Amaranthus hybridus
Ah.08g211300 Amaranthus hybridus
AL1G12620 Arabidopsis lyrata
Aqoxy5G00486 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DZ64CF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TC3YPE Arachis hypogaea
AT1G03150 Arabidopsis thaliana
ATR0332G108 Amborella trichopoda
Atru.chr1.1080 Acer truncatum
Atru.chr5.1454 Acer truncatum
Atru.chr5.1455 Acer truncatum
AUR62019565 Chenopodium quinoa
AUR62026977 Chenopodium quinoa
AUR62029075 Chenopodium quinoa
BcaC05g24554 Brassica carinata
BcaC05g24556 Brassica carinata
BcaC05g24631 Brassica carinata
BolC8t46842H Brassica oleracea
BraA08t35644Z Brassica rapa
BraA10t42452Z Brassica rapa
C05p01750 Brassica napus
C08p00430 Brassica napus
CAN.G308.71 Capsicum annuum
CANSAT25G3124 Cannabis sativa
CARHR002490 Cardamine hirsuta
Carub.0001s0229 Capsella rubella
Ca_09493_v3 Cicer arietinum L.
CBR_g41307 Chara braunii
Cc01_g19390 Coffea canephora
CDE02G2156 Ceratophyllum demersum
Ciclev10022184m.g Citrus clementina
CiPaw.08G105700 Carya illinoinensis
ClCG09G007100 Citrullus lanatus
COL.COLO4_09080 Corchorus olitorius
COL.COLO4_09081 Corchorus olitorius
Cpa.g.sc52.44 Carica papaya
Cre08.g383150 Chlamydomonas reinhardtii
CsaV3_7G028070 Cucumis sativus L.
CSS0013604 Camellia sinensis var. sinensis
DCAR_012484 Daucus carota
Dinv32924 Davidia involucrata
Dinv34763 Davidia involucrata
Duzib138G0620 Durio zibethinus
Duzib211G0381 Durio zibethinus
ECA236G5031 Erigeron canadensis
EL10Ac2g03768 Beta vulgaris
EL10Ac7g16708 Beta vulgaris
Eucgr.K03364 Eucalyptus grandis
FAN15G2915 Fragaria x ananassa
FAN20G0031 Fragaria x ananassa
FAN24G0191 Fragaria x ananassa
FAN27G1453 Fragaria x ananassa
FvH4_2g23390 Fragaria vesca
Glyma.03G154800 Glycine max
Glyma.19G157100 Glycine max
Gohir.A08G066400 Gossypium hirsutum
Gohir.A08G186200 Gossypium hirsutum
Gohir.D08G075100 Gossypium hirsutum
Gohir.D08G204300 Gossypium hirsutum
Gorai.004G079400 Gossypium raimondii
Gorai.004G216300 Gossypium raimondii
GSVIVG01001156001 Vitis vinifera
HanXRQChr04g0118891 Helianthus annuus
Haze_04696 Corylus avellana
Haze_26338 Corylus avellana
Hma1.2p1_0822F.1_g224450 Hydrangea macrophylla
Hma1.2p1_0822F.1_g224460 Hydrangea macrophylla
HPP92_023571 Vanilla planifolia
Hund26623 Selenicereus undatus
Lalb_Chr02g0142721 Lupinus albus
Lj1A47G37 Lonicera japonica
Lj5g0011651 Lotus japonicus
Lsat_1_v5_gn_8_56441 Lactuca sativa
Manes.01G207200 Manihot esculenta
Mapoly0054s0004 Marchantia polymorpha
MBI01_g45394_MAGBIO Magnolia biondii
MCO07G257 Micromonas commoda
MD03G1263400 Malus domestica
MD11G1284200 Malus domestica
Medtr7g117040 Medicago truncatula
MELO3C015828.2 Cucumis melo
Migut.N02047 Erythranthe guttata
MSTRG.12560 Avicennia marina
MSTRG.17448 Avicennia marina
Nitab4.5_0001082g0090 Nicotiana tabacum
Nn4g26287 Nelumbo nucifera
Oeu047872.1 Olea europaea
Os03g0699400 Oryza sativa ssp. japonica
Peaxi162Scf00268g00086 Petunia axillaris
PGR044G1983 Punica granatum
PGSC0003DMG400026070 Solanum tuberosum
Phvul.001G152200 Phaseolus vulgaris
Potri.002G052000 Populus trichocarpa
Potri.005G210400 Populus trichocarpa
Pp3c10_6780 Physcomitrium patens
PRCOL_00006102 Prasinoderma coloniale
Prupe.8G239800 Prunus persica
Psat3g003080 Pisum sativum
PSO063G6282 Papaver somniferum
PSO170G5254 Papaver somniferum
PSO210G0941 Papaver somniferum
PSO210G3303 Papaver somniferum
PSO761G0472 Papaver somniferum
PSO832G0751 Papaver somniferum
RcHm_v2.0_Chr6g0290851 Rosa chinensis
Rhsim01G0274200 Rhododendron simsii
Sabra02G0042100 Salix brachista
Sabra05G0160500 Salix brachista
SalBow6G1090 Salvia bowleyana
Sc24g0002770 Simmondsia chinensis
Sed0015744 Sechium edule
SEGI_22390 Sequoiadendron giganteum
SGA_v2.0_scaffold81G26013 Striga asiatica
SMO118G0064 Selaginella moellendorffii
Solyc06g065230.3 Solanum lycopersicum
Sopen06g023720 Solanum pennellii
Sp1g02180 Schrenkiella parvula
TAR365G0913 Trochodendron aralioides
THA.LOC104815941 Tarenaya hassleriana
THA.LOC104825996 Tarenaya hassleriana
Thecc.01G277400 Theobroma cacao
Thhalv10008907m.g Eutrema salsugineum
TPR.G4786 Trifolium pratense
TWI59G0659 Tripterygium wilfordii
unitig_0.g547 Utricularia gibba
unitig_0.g548 Utricularia gibba
vmacro14916 Vaccinium macrocarpon
VMungo1383G3274 Vigna mungo
Zm00001eb054010 Zea mays

User provided reference genes

Program Settings