Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30690 Brassica napus
A09p02300 Brassica napus
Aa31LG5G2530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis
Actinidia24310 Actinidia chinensis
Ah.04g164000 Amaranthus hybridus
Ah.08g212880 Amaranthus hybridus
AL6G49950 Arabidopsis lyrata
Aqoxy2G03192 Aquilegia oxysepala
AT4G02980 Arabidopsis thaliana
ATR0626G241 Amborella trichopoda
Atru.chr5.1332 Acer truncatum
AUR62033690 Chenopodium quinoa
AUR62036778 Chenopodium quinoa
BcaB01g01993 Brassica carinata
BcaB01g02494 Brassica carinata
BcaC01g06714 Brassica carinata
BolC3t16031H Brassica oleracea
BolC9t53172H Brassica oleracea
BraA03t12248Z Brassica rapa
BraA09t35879Z Brassica rapa
C03p37390 Brassica napus
C09p02410 Brassica napus
C09p02610 Brassica napus
CAN.G1682.11 Capsicum annuum
CAN.G996.16 Capsicum annuum
CANSAT25G0672 Cannabis sativa
CARHR251350 Cardamine hirsuta
Carub.0006s3407 Capsella rubella
Ca_10397_v3 Cicer arietinum L.
CBR_g38020 Chara braunii
Cc00_g05320 Coffea canephora
Cc01_g03720 Coffea canephora
Cc01_g05150 Coffea canephora
CDE08G1024 Ceratophyllum demersum
Cfa006081 Carpinus fangiana
Ciclev10022400m.g Citrus clementina
CiPaw.08G102100 Carya illinoinensis
ClCG09G006770 Citrullus lanatus
Cpa.g.sc9.126 Carica papaya
CsaV3_7G028500 Cucumis sativus L.
CSS0004068 Camellia sinensis var. sinensis
CSS0017429 Camellia sinensis var. sinensis
Dinv11265 Davidia involucrata
Duzib138G1703 Durio zibethinus
ECA248G0764 Erigeron canadensis
ECA248G1579 Erigeron canadensis
EL10Ac7g17192 Beta vulgaris
Eucgr.H01544 Eucalyptus grandis
FAN15G1986 Fragaria x ananassa
FAN20G1753 Fragaria x ananassa
FAN24G1361 Fragaria x ananassa
FAN27G2557 Fragaria x ananassa
FvH4_2g24150 Fragaria vesca
Glyma.02G150100 Glycine max
Gohir.A12G006700 Gossypium hirsutum
Gohir.D12G006100 Gossypium hirsutum
Gorai.008G006100 Gossypium raimondii
GSVIVG01011062001 Vitis vinifera
HanXRQChr14g0430981 Helianthus annuus
Haze_04768 Corylus avellana
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla
HPP92_010620 Vanilla planifolia
HPP92_017198 Vanilla planifolia
HPP92_027334 Vanilla planifolia
Hund06566 Selenicereus undatus
Lalb_Chr06g0163181 Lupinus albus
Lj2A1180T63 Lonicera japonica
Lj5g0014836 Lotus japonicus
Lsat_1_v5_gn_4_17561 Lactuca sativa
Lsat_1_v5_gn_5_187740 Lactuca sativa
Manes.01G211300 Manihot esculenta
Manes.05G072000 Manihot esculenta
MBI19_g33449_MAGBIO Magnolia biondii
MBI19_g39288_MAGBIO Magnolia biondii
MD03G1271500 Malus domestica
MD11G1292100 Malus domestica
Medtr1g089810 Medicago truncatula
MELO3C015871.2 Cucumis melo
Migut.D00251 Erythranthe guttata
Migut.N02139 Erythranthe guttata
Migut.N02175 Erythranthe guttata
MSTRG.12575 Avicennia marina
MSTRG.17433 Avicennia marina
Nitab4.5_0002093g0100 Nicotiana tabacum
Nitab4.5_0010603g0020 Nicotiana tabacum
Nn1g02106 Nelumbo nucifera
Oeu006228.1 Olea europaea
Oeu047892.2 Olea europaea
Os12g0529300 Oryza sativa ssp. japonica
Os12g0529400 Oryza sativa ssp. japonica
Peaxi162Scf00783g00418 Petunia axillaris
PGR119G1915 Punica granatum
PGSC0003DMG401020044 Solanum tuberosum
Phvul.007G168600 Phaseolus vulgaris
Potri.002G212400 Populus trichocarpa
Pp3c4_12660 Physcomitrium patens
Pp3c4_12750 Physcomitrium patens
Prupe.8G247700 Prunus persica
Psat6g169920 Pisum sativum
PSO170G3928 Papaver somniferum
PSO302G0130 Papaver somniferum
QL02p002445 Quercus lobata
QL02p081958 Quercus lobata
RcHm_v2.0_Chr6g0291961 Rosa chinensis
Rhsim13G0021200 Rhododendron simsii
Rhsim13G0021300 Rhododendron simsii
Rhsim13G0021400 Rhododendron simsii
SalBow3G3506 Salvia bowleyana
SalBow6G2366 Salvia bowleyana
Sc24g0004070 Simmondsia chinensis
Sed0003723 Sechium edule
SGA_v2.0_scaffold172G39038 Striga asiatica
SGA_v2.0_scaffold1G00437 Striga asiatica
SMO164G0245 Selaginella moellendorffii
Solyc06g084390.3 Solanum lycopersicum
Sopen06g035780 Solanum pennellii
Sp6g03020 Schrenkiella parvula
TAR365G0921 Trochodendron aralioides
THA.LOC104801212 Tarenaya hassleriana
THA.LOC104826003 Tarenaya hassleriana
Thecc.01G285600 Theobroma cacao
Thecc.01G285700 Theobroma cacao
Thhalv10028980m.g Eutrema salsugineum
TPR.G13316 Trifolium pratense
TPR.G26671 Trifolium pratense
TWI59G0853 Tripterygium wilfordii
unitig_8.g3319 Utricularia gibba
vmacro02538 Vaccinium macrocarpon
vmacro02539 Vaccinium macrocarpon
VMungo0720G2830 Vigna mungo
Zm00001eb137840 Zea mays
Zm00001eb410760 Zea mays
Zm00001eb410780 Zea mays
Zm00001eb410800 Zea mays
Zm00001eb440220 Zea mays

User provided reference genes

Program Settings