Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01690 Brassica napus
A10p31640 Brassica napus
Aa31LG11G5310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.955 Anthoceros agrestis
Actinidia34788 Actinidia chinensis
Actinidia38892 Actinidia chinensis
AL6G14080 Arabidopsis lyrata
Aqoxy1G01068 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D7GKH1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLH1MA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7ZK73 Arachis hypogaea
AT5G04440 Arabidopsis thaliana
ATR0043G051 Amborella trichopoda
Atru.chr12.910 Acer truncatum
AUR62022764 Chenopodium quinoa
AUR62029215 Chenopodium quinoa
BcaB01g05899 Brassica carinata
BcaB01g05900 Brassica carinata
BcaC06g32152 Brassica carinata
BcaNung07228 Brassica carinata
BolC3t12759H Brassica oleracea
BolC9t59975H Brassica oleracea
BraA03t09544Z Brassica rapa
BraA10t45210Z Brassica rapa
C03p02060 Brassica napus
C09p72310 Brassica napus
CAN.G1891.6 Capsicum annuum
CANSAT56G1373 Cannabis sativa
CARHR208820 Cardamine hirsuta
Carub.0006s0338 Capsella rubella
Ca_26010_v3 Cicer arietinum L.
CBR_g10878 Chara braunii
Cc02_g10560 Coffea canephora
CDE09G1384 Ceratophyllum demersum
Cfa001774 Carpinus fangiana
Ciclev10032582m.g Citrus clementina
CiPaw.01G265100 Carya illinoinensis
CiPaw.02G170000 Carya illinoinensis
ClCG08G007920 Citrullus lanatus
COL.COLO4_32883 Corchorus olitorius
Cpa.g.sc53.169 Carica papaya
Cre06.g264550 Chlamydomonas reinhardtii
Cre16.g677850 Chlamydomonas reinhardtii
CsaV3_2G032730 Cucumis sativus L.
CSS0017585 Camellia sinensis var. sinensis
CSS0024490 Camellia sinensis var. sinensis
CSS0044057 Camellia sinensis var. sinensis
CSS0044078 Camellia sinensis var. sinensis
Dinv31263 Davidia involucrata
Duzib106G0901 Durio zibethinus
ECA233G6102 Erigeron canadensis
ECA238G2005 Erigeron canadensis
EL10Ac4g08634 Beta vulgaris
FAN03G2335 Fragaria x ananassa
FAN10G0584 Fragaria x ananassa
FAN10G1117 Fragaria x ananassa
FvH4_7g06650 Fragaria vesca
Glyma.02G164300 Glycine max
Glyma.10G102440 Glycine max
Glyma.U031112 Glycine max
Gohir.A05G393500 Gossypium hirsutum
Gohir.D04G021400 Gossypium hirsutum
Gorai.012G025500 Gossypium raimondii
GSVIVG01016163001 Vitis vinifera
HanXRQChr11g0335951 Helianthus annuus
HanXRQChr14g0456161 Helianthus annuus
Haze_16777 Corylus avellana
Hma1.2p1_0454F.1_g156230 Hydrangea macrophylla
Hma1.2p1_0454F.1_g156240 Hydrangea macrophylla
Hma1.2p1_1040F.1_g250960 Hydrangea macrophylla
HPP92_004967 Vanilla planifolia
Hund06763 Selenicereus undatus
Lalb_Chr01g0010291 Lupinus albus
Lj1g0010858 Lotus japonicus
Lj1g0018185 Lotus japonicus
Lj2A24T67 Lonicera japonica
Lsat_1_v5_gn_2_103220 Lactuca sativa
Manes.11G085375 Manihot esculenta
Mapoly0083s0065 Marchantia polymorpha
MBI11_g23276_MAGBIO Magnolia biondii
MBI11_g29032_MAGBIO Magnolia biondii
MBI19_g03561_MAGBIO Magnolia biondii
MCO03G547 Micromonas commoda
MCO14G381 Micromonas commoda
MD07G1074500 Malus domestica
Medtr1g050530 Medicago truncatula
MELO3C019851.2 Cucumis melo
Migut.F01676 Erythranthe guttata
MSTRG.400 Avicennia marina
Nitab4.5_0000096g0200 Nicotiana tabacum
Nitab4.5_0002692g0080 Nicotiana tabacum
Nn3g19086 Nelumbo nucifera
Nn6g35199 Nelumbo nucifera
Oeu046658.1 Olea europaea
Os03g0146500 Oryza sativa ssp. japonica
Peaxi162Scf01201g00017 Petunia axillaris
PGR142G0169 Punica granatum
PGSC0003DMG400023376 Solanum tuberosum
Phvul.007G244000 Phaseolus vulgaris
Potri.008G030300 Populus trichocarpa
Potri.010G230900 Populus trichocarpa
Pp3c1_19240 Physcomitrium patens
PRCOL_00001490 Prasinoderma coloniale
PRCOL_00003535 Prasinoderma coloniale
Prupe.2G094500 Prunus persica
Psat6g095240 Pisum sativum
PSO063G2079 Papaver somniferum
PSO339G4237 Papaver somniferum
QL08p053081 Quercus lobata
RcHm_v2.0_Chr1g0336111 Rosa chinensis
Rhsim09G0145300 Rhododendron simsii
Sabra10G0179000 Salix brachista
SalBow6G6710 Salvia bowleyana
Sc20g0001510 Simmondsia chinensis
Sed0005120 Sechium edule
Sed0026830 Sechium edule
SEGI_13772 Sequoiadendron giganteum
SEGI_20571 Sequoiadendron giganteum
SGA_v2.0_scaffold41G15744 Striga asiatica
SMO196G0037 Selaginella moellendorffii
Solyc05g055430.4 Solanum lycopersicum
Sopen05g033880 Solanum pennellii
Sp6g38300 Schrenkiella parvula
TAR369G0193 Trochodendron aralioides
TAR369G0971 Trochodendron aralioides
THA.LOC104823196 Tarenaya hassleriana
Thecc.10G089800 Theobroma cacao
Thhalv10014494m.g Eutrema salsugineum
TWI38G0818 Tripterygium wilfordii
unitig_749.g13568 Utricularia gibba
unitig_749.g13569 Utricularia gibba
vmacro10263 Vaccinium macrocarpon
VMungo0720G2730 Vigna mungo
Zm00001eb003780 Zea mays
Zm00001eb006030 Zea mays
Zm00001eb313560 Zea mays

User provided reference genes

Program Settings