Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p43890 Brassica napus
Aa31LG4G2340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis
Actinidia12601 Actinidia chinensis
Actinidia37024 Actinidia chinensis
Actinidia39422 Actinidia chinensis
Ah.04g164050 Amaranthus hybridus
AL2G39020 Arabidopsis lyrata
Aqoxy1G01911 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea
AT1G78620 Arabidopsis thaliana
ATR0213G027 Amborella trichopoda
Atru.chr2.2008 Acer truncatum
AUR62019646 Chenopodium quinoa
AUR62039586 Chenopodium quinoa
BcaB02g07173 Brassica carinata
BcaC08g47425 Brassica carinata
BcaC08g47427 Brassica carinata
BolC6t40271H Brassica oleracea
BraA07t31896Z Brassica rapa
C06p52520 Brassica napus
CAN.G375.48 Capsicum annuum
CARHR072110 Cardamine hirsuta
CARHR072140 Cardamine hirsuta
Carub.0002s2547 Capsella rubella
Ca_03931_v3 Cicer arietinum L.
CBR_g26242 Chara braunii
Cc05_g10740 Coffea canephora
CDE02G0824 Ceratophyllum demersum
CDE06G0498 Ceratophyllum demersum
Cfa019514 Carpinus fangiana
Ciclev10021126m.g Citrus clementina
CiPaw.11G155600 Carya illinoinensis
CiPaw.12G110500 Carya illinoinensis
ClCG07G010100 Citrullus lanatus
COL.COLO4_17478 Corchorus olitorius
Cpa.g.sc77.58 Carica papaya
Cre06.g294800 Chlamydomonas reinhardtii
CsaV3_4G008250 Cucumis sativus L.
CSS0007542 Camellia sinensis var. sinensis
CSS0028539 Camellia sinensis var. sinensis
CSS0029451 Camellia sinensis var. sinensis
DCAR_013779 Daucus carota
DCAR_019613 Daucus carota
Dinv08683 Davidia involucrata
Dinv13365 Davidia involucrata
ECA240G3195 Erigeron canadensis
EL10Ac4g08415 Beta vulgaris
Eucgr.F01366 Eucalyptus grandis
FAN11G1539 Fragaria x ananassa
FAN16G3421 Fragaria x ananassa
FAN21G2533 Fragaria x ananassa
FAN25G0494 Fragaria x ananassa
FvH4_3g17770 Fragaria vesca
FvH4_7g00710 Fragaria vesca
Glyma.12G233800 Glycine max
Glyma.13G265200 Glycine max
Gohir.A11G289100 Gossypium hirsutum
Gohir.D11G303400 Gossypium hirsutum
Gorai.007G331300 Gossypium raimondii
GSVIVG01014100001 Vitis vinifera
HanXRQChr13g0389711 Helianthus annuus
HanXRQChr14g0439361 Helianthus annuus
Haze_09244 Corylus avellana
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla
HPP92_006376 Vanilla planifolia
Lalb_Chr20g0109131 Lupinus albus
Lj1A824T64 Lonicera japonica
Lj3g0018973 Lotus japonicus
Lj8A146G72 Lonicera japonica
Lsat_1_v5_gn_9_100441 Lactuca sativa
Manes.03G092700 Manihot esculenta
Manes.15G097700 Manihot esculenta
Mapoly0056s0015 Marchantia polymorpha
MBI06_g08519_MAGBIO Magnolia biondii
MCO15G637 Micromonas commoda
MD03G1247900 Malus domestica
MD11G1269700 Malus domestica
Medtr2g073380 Medicago truncatula
Medtr7g055620 Medicago truncatula
MELO3C016111.2 Cucumis melo
MELO3C029615.2 Cucumis melo
MELO3C032042.2 Cucumis melo
Migut.M00694 Erythranthe guttata
MSTRG.14252 Avicennia marina
MSTRG.6687 Avicennia marina
Nitab4.5_0000347g0060 Nicotiana tabacum
Nitab4.5_0003230g0020 Nicotiana tabacum
Nn3g21006 Nelumbo nucifera
Oeu010029.1 Olea europaea
Os01g0729100 Oryza sativa ssp. japonica
Peaxi162Scf00111g01334 Petunia axillaris
PGR083G0120 Punica granatum
PGSC0003DMG400007091 Solanum tuberosum
Phvul.005G076800 Phaseolus vulgaris
Potri.001G384300 Populus trichocarpa
Potri.011G105700 Populus trichocarpa
Pp3c13_15320 Physcomitrium patens
Pp3c13_3550 Physcomitrium patens
PRCOL_00000954 Prasinoderma coloniale
Prupe.4G156800 Prunus persica
Psat5g233280 Pisum sativum
PSO541G1284 Papaver somniferum
QL08p037175 Quercus lobata
QL08p037250 Quercus lobata
RcHm_v2.0_Chr5g0029561 Rosa chinensis
Rhsim06G0211500 Rhododendron simsii
Sabra11G0074900 Salix brachista
Sabra11G0080500 Salix brachista
SalBow4G2873 Salvia bowleyana
SalBow7G3647 Salvia bowleyana
Sc16g0007730 Simmondsia chinensis
Sed0019309 Sechium edule
SEGI_05295 Sequoiadendron giganteum
SEGI_06384 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24389 Striga asiatica
SHI27569 Sapria himalayana
SMO331G0093 Selaginella moellendorffii
Solyc07g062180.4 Solanum lycopersicum
Sopen07g030460 Solanum pennellii
Sp5g33710 Schrenkiella parvula
TAR629G2232 Trochodendron aralioides
THA.LOC104813995 Tarenaya hassleriana
Thecc.07G131100 Theobroma cacao
Thecc.07G131400 Theobroma cacao
Thecc.07G131900 Theobroma cacao
Thecc.07G132200 Theobroma cacao
Thhalv10018838m.g Eutrema salsugineum
TPR.G13095 Trifolium pratense
TWI39G0441 Tripterygium wilfordii
unitig_37.g12557 Utricularia gibba
unitig_746.g26834 Utricularia gibba
vmacro11968 Vaccinium macrocarpon
VMungo1080G0954 Vigna mungo
Zm00001eb361870 Zea mays

User provided reference genes

Program Settings