Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08640 Brassica napus
A07p08110 Brassica napus
Aa31LG8G10940 Aethionema arabicum
Aa31LG9G4120 Aethionema arabicum
Actinidia11384 Actinidia chinensis
Actinidia39942 Actinidia chinensis
Ah.13g075010 Amaranthus hybridus
AL3G39620 Arabidopsis lyrata
AL7G43130 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea
AT3G23930 Arabidopsis thaliana
AT4G13540 Arabidopsis thaliana
ATR0088G022 Amborella trichopoda
Atru.chr4.1856 Acer truncatum
AUR62035343 Chenopodium quinoa
AUR62035897 Chenopodium quinoa
BcaB03g16086 Brassica carinata
BcaB06g26605 Brassica carinata
BcaC01g03341 Brassica carinata
BcaC02g09418 Brassica carinata
BcaC06g35669 Brassica carinata
BolC3t17610H Brassica oleracea
BolC4t25821H Brassica oleracea
BolC7t41693H Brassica oleracea
BraA04t16558Z Brassica rapa
BraA07t28595Z Brassica rapa
C03p53500 Brassica napus
C04p42400 Brassica napus
C07p12260 Brassica napus
CAN.G566.3 Capsicum annuum
CAN.G812.40 Capsicum annuum
CANSAT78G1745 Cannabis sativa
CARHR100340 Cardamine hirsuta
CARHR219170 Cardamine hirsuta
Carub.0003s2459 Capsella rubella
Carub.0007s2900 Capsella rubella
Cc03_g06970 Coffea canephora
CDE02G0931 Ceratophyllum demersum
CDE05G1332 Ceratophyllum demersum
CDE05G2497 Ceratophyllum demersum
CDE08G0630 Ceratophyllum demersum
Cfa014837 Carpinus fangiana
Ciclev10005805m.g Citrus clementina
CiPaw.01G174800 Carya illinoinensis
CiPaw.02G104000 Carya illinoinensis
ClCG06G017260 Citrullus lanatus
COL.COLO4_07143 Corchorus olitorius
Cpa.g.sc59.48 Carica papaya
CsaV3_1G001240 Cucumis sativus L.
CSS0038279 Camellia sinensis var. sinensis
DCAR_024305 Daucus carota
Dinv27139 Davidia involucrata
Duzib151G0493 Durio zibethinus
Duzib212G0179 Durio zibethinus
ECA233G3140 Erigeron canadensis
EL10Ac3g06730 Beta vulgaris
Eucgr.H02876 Eucalyptus grandis
FAN07G2767 Fragaria x ananassa
FAN12G1366 Fragaria x ananassa
FAN17G2424 Fragaria x ananassa
FAN22G1047 Fragaria x ananassa
FvH4_4g05260 Fragaria vesca
Glyma.10G130200 Glycine max
Glyma.14G108200 Glycine max
Glyma.20G081000 Glycine max
Gohir.A09G201000 Gossypium hirsutum
Gohir.D09G195200 Gossypium hirsutum
Gorai.006G218600 Gossypium raimondii
GSVIVG01001870001 Vitis vinifera
Haze_11516 Corylus avellana
Haze_11522 Corylus avellana
HPP92_005453 Vanilla planifolia
Hund24861 Selenicereus undatus
Lalb_Chr03g0036851 Lupinus albus
Lalb_Chr19g0128591 Lupinus albus
Lj6g0023034 Lotus japonicus
Lsat_1_v5_gn_6_67840 Lactuca sativa
Manes.03G155600 Manihot esculenta
Manes.15G047800 Manihot esculenta
MBI07_g15425_MAGBIO Magnolia biondii
MD13G1226700 Malus domestica
Medtr1g046070 Medicago truncatula
MELO3C026270.2 Cucumis melo
Migut.N00325 Erythranthe guttata
MSTRG.21934 Avicennia marina
MSTRG.24645 Avicennia marina
Nitab4.5_0000451g0070 Nicotiana tabacum
Nitab4.5_0000867g0050 Nicotiana tabacum
Nitab4.5_0001998g0050 Nicotiana tabacum
Nitab4.5_0002738g0060 Nicotiana tabacum
Nn1g03052 Nelumbo nucifera
Nn3g19835 Nelumbo nucifera
Oeu007537.1 Olea europaea
Oeu008818.1 Olea europaea
Peaxi162Scf00125g01016 Petunia axillaris
Peaxi162Scf01007g00013 Petunia axillaris
PGSC0003DMG400008629 Solanum tuberosum
PGSC0003DMG400011585 Solanum tuberosum
Phvul.007G233100 Phaseolus vulgaris
Potri.008G174400 Populus trichocarpa
Potri.010G062600 Populus trichocarpa
Prupe.1G054100 Prunus persica
Psat6g106680 Pisum sativum
PSO063G5372 Papaver somniferum
PSO339G1845 Papaver somniferum
QL06p022167 Quercus lobata
RcHm_v2.0_Chr4g0396171 Rosa chinensis
Rhsim02G0049300 Rhododendron simsii
Sabra08G0132900 Salix brachista
Sabra10G0044100 Salix brachista
SalBow3G1865 Salvia bowleyana
SalBow3G3550 Salvia bowleyana
Sc19g0005740 Simmondsia chinensis
Sed0003887 Sechium edule
Sed0013611 Sechium edule
SGA_v2.0_scaffold31G12607 Striga asiatica
Solyc09g091060.3 Solanum lycopersicum
Solyc12g097060.1 Solanum lycopersicum
Sopen09g034040 Solanum pennellii
Sp3g22030 Schrenkiella parvula
Sp7g11140 Schrenkiella parvula
TAR362G0923 Trochodendron aralioides
TAR365G1050 Trochodendron aralioides
THA.LOC104804567 Tarenaya hassleriana
THA.LOC104808734 Tarenaya hassleriana
THA.LOC104821627 Tarenaya hassleriana
Thecc.04G218700 Theobroma cacao
Thhalv10002645m.g Eutrema salsugineum
Thhalv10026312m.g Eutrema salsugineum
TPR.G23989 Trifolium pratense
TWI09G0842 Tripterygium wilfordii
TWI53G2060 Tripterygium wilfordii
unitig_26.g9545 Utricularia gibba
vmacro15494 Vaccinium macrocarpon
VMungo0720G1671 Vigna mungo

User provided reference genes

Program Settings