Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03210 Brassica napus
A10p23260 Brassica napus
Aa31LG11G13810 Aethionema arabicum
Aa31LG5G12820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.340 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis
Ah.01g020980 Amaranthus hybridus
AL6G26610 Arabidopsis lyrata
Aqoxy1G00460 Aquilegia oxysepala
Aqoxy2G01202 Aquilegia oxysepala
Aqoxy5G03051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea
AT5G15770 Arabidopsis thaliana
ATR0605G169 Amborella trichopoda
ATR0618G201 Amborella trichopoda
Atru.chr8.1538 Acer truncatum
AUR62028517 Chenopodium quinoa
BcaC03g18448 Brassica carinata
BcaC04g18939 Brassica carinata
BcaNung02203 Brassica carinata
BolC2t06719H Brassica oleracea
BolC9t58974H Brassica oleracea
BraA02t05292Z Brassica rapa
BraA10t44394Z Brassica rapa
C02p07960 Brassica napus
C09p61330 Brassica napus
CAN.G397.49 Capsicum annuum
CANSAT80G0528 Cannabis sativa
CARHR197560 Cardamine hirsuta
Carub.0006s1392 Capsella rubella
Ca_09006_v3 Cicer arietinum L.
CBR_g37710 Chara braunii
Cc03_g11090 Coffea canephora
Cfa016607 Carpinus fangiana
Ciclev10012817m.g Citrus clementina
CiPaw.09G014000 Carya illinoinensis
CiPaw.10G009800 Carya illinoinensis
ClCG10G018970 Citrullus lanatus
COL.COLO4_29734 Corchorus olitorius
Cpa.g.sc5.19 Carica papaya
Cre12.g560200 Chlamydomonas reinhardtii
CsaV3_3G037280 Cucumis sativus L.
CSS0033781 Camellia sinensis var. sinensis
DCAR_007752 Daucus carota
DCAR_013385 Daucus carota
Dinv21209 Davidia involucrata
Dinv31687 Davidia involucrata
Duzib106G0894 Durio zibethinus
ECA240G0707 Erigeron canadensis
EL10Ac7g16916 Beta vulgaris
Eucgr.K02040 Eucalyptus grandis
FAN05G4755 Fragaria x ananassa
FAN05G5721 Fragaria x ananassa
FAN09G4491 Fragaria x ananassa
FAN14G5868 Fragaria x ananassa
FvH4_6g18700 Fragaria vesca
Glyma.03G195900 Glycine max
Glyma.19G194929 Glycine max
Gohir.A01G138000 Gossypium hirsutum
Gohir.D01G127700 Gossypium hirsutum
Gorai.002G158300 Gossypium raimondii
GSVIVG01033843001 Vitis vinifera
HanXRQChr03g0060731 Helianthus annuus
HanXRQChr07g0189921 Helianthus annuus
Haze_19611 Corylus avellana
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla
HPP92_015765 Vanilla planifolia
Lalb_Chr01g0018151 Lupinus albus
Lj2P1003T8 Lonicera japonica
Lj2P137T17 Lonicera japonica
Lsat_1_v5_gn_7_37701 Lactuca sativa
Manes.08G025300 Manihot esculenta
Mapoly0046s0019 Marchantia polymorpha
MBI04_g14262_MAGBIO Magnolia biondii
MCO13G065 Micromonas commoda
MD06G1040400 Malus domestica
MD12G1036200 Malus domestica
MD14G1023000 Malus domestica
Medtr7g104610 Medicago truncatula
MELO3C009473.2 Cucumis melo
Migut.C00979 Erythranthe guttata
MSTRG.19260 Avicennia marina
Nitab4.5_0000794g0110 Nicotiana tabacum
Nn2g14158 Nelumbo nucifera
Oeu017678.1 Olea europaea
Oeu017679.1 Olea europaea
Os02g0717700 Oryza sativa ssp. japonica
Os09g0488000 Oryza sativa ssp. japonica
Peaxi162Scf00006g00016 Petunia axillaris
Peaxi162Scf00068g02511 Petunia axillaris
PGR142G1689 Punica granatum
PGSC0003DMG400008956 Solanum tuberosum
Phvul.001G189800 Phaseolus vulgaris
Potri.018G086400 Populus trichocarpa
Pp3c14_20090 Physcomitrium patens
PRCOL_00001568 Prasinoderma coloniale
Prupe.7G110200 Prunus persica
Psat3g033280 Pisum sativum
PSO339G3505 Papaver somniferum
PSO384G1553 Papaver somniferum
QL07p038757 Quercus lobata
QL07p039009 Quercus lobata
RcHm_v2.0_Chr3g0473671 Rosa chinensis
Rhsim03G0075100 Rhododendron simsii
Rhsim03G0187900 Rhododendron simsii
Sabra18G0074700 Salix brachista
SalBow3G1016 Salvia bowleyana
SalBow6G6426 Salvia bowleyana
Sc02g0000250 Simmondsia chinensis
Sed0001709 Sechium edule
Sed0022063 Sechium edule
SEGI_17930 Sequoiadendron giganteum
SEGI_26718 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36838 Striga asiatica
SGA_v2.0_scaffold75G24749 Striga asiatica
SHI28289 Sapria himalayana
SMO364G0918 Selaginella moellendorffii
Solyc09g009780.4 Solanum lycopersicum
Sopen09g004540 Solanum pennellii
Sp6g28350 Schrenkiella parvula
TAR374G1347 Trochodendron aralioides
THA.LOC104820979 Tarenaya hassleriana
Thecc.05G089100 Theobroma cacao
Thhalv10014892m.g Eutrema salsugineum
TPR.G19517 Trifolium pratense
TPR.G22495 Trifolium pratense
TPR.G30027 Trifolium pratense
TWI53G1247 Tripterygium wilfordii
TWI77G0870 Tripterygium wilfordii
VMungo0540G0323 Vigna mungo
VMungo1383G2413 Vigna mungo
VMungo1383G2828 Vigna mungo
Zm00001eb189250 Zea mays

User provided reference genes

Program Settings