Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41050 Brassica napus
Aa31LG1G15820 Aethionema arabicum
Aa31LG1G15830 Aethionema arabicum
Aa31LG1G15840 Aethionema arabicum
Aa31LG1G18440 Aethionema arabicum
Aa31LG1G18450 Aethionema arabicum
Aa31sc2295G10 Aethionema arabicum
Aa31sc2295G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis
Actinidia12019 Actinidia chinensis
Actinidia36463 Actinidia chinensis
AL8G44040 Arabidopsis lyrata
Aqoxy6G02871 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea
AT5G67290 Arabidopsis thaliana
ATR1098G030 Amborella trichopoda
Atru.chr3.251 Acer truncatum
AUR62003938 Chenopodium quinoa
AUR62038254 Chenopodium quinoa
BcaB06g28844 Brassica carinata
BcaC05g29844 Brassica carinata
BcaC07g37383 Brassica carinata
BcaNung00805 Brassica carinata
BolC5t34672H Brassica oleracea
BolC8t47687H Brassica oleracea
BolC8t47689H Brassica oleracea
BraA05t22832Z Brassica rapa
C05p60220 Brassica napus
CAN.G572.58 Capsicum annuum
CANSAT25G0291 Cannabis sativa
CANSAT25G2140 Cannabis sativa
CARHR280330 Cardamine hirsuta
Carub.0008s2721 Capsella rubella
Ca_22124_v3 Cicer arietinum L.
Cc11_g04760 Coffea canephora
CDE06G0326 Ceratophyllum demersum
Cfa004061 Carpinus fangiana
Cfa026332 Carpinus fangiana
Ciclev10025664m.g Citrus clementina
CiPaw.01G012900 Carya illinoinensis
ClCG01G017080 Citrullus lanatus
COL.COLO4_11482 Corchorus olitorius
Cpa.g.sc6.99 Carica papaya
Cre16.g671450 Chlamydomonas reinhardtii
CsaV3_6G043550 Cucumis sativus L.
CSS0006569 Camellia sinensis var. sinensis
DCAR_025759 Daucus carota
Dinv26866 Davidia involucrata
Dinv30033 Davidia involucrata
Duzib147G1433 Durio zibethinus
Duzib264G0643 Durio zibethinus
ECA238G4251 Erigeron canadensis
ECA246G1807 Erigeron canadensis
EL10Ac6g15690 Beta vulgaris
Eucgr.I00761 Eucalyptus grandis
Eucgr.I00787 Eucalyptus grandis
FAN19G0282 Fragaria x ananassa
FAN23G2399 Fragaria x ananassa
FAN26G1197 Fragaria x ananassa
FAN28G1711 Fragaria x ananassa
FAN28G1889 Fragaria x ananassa
FvH4_1g16760 Fragaria vesca
Glyma.05G097800 Glycine max
Glyma.17G167200 Glycine max
Gohir.A11G220300 Gossypium hirsutum
Gohir.D11G203300 Gossypium hirsutum
Gorai.007G218000 Gossypium raimondii
HanXRQChr02g0044351 Helianthus annuus
HanXRQChr12g0377261 Helianthus annuus
Haze_15351 Corylus avellana
HPP92_017700 Vanilla planifolia
HPP92_017733 Vanilla planifolia
HPP92_028926 Vanilla planifolia
Hund16366 Selenicereus undatus
Lalb_Chr16g0388811 Lupinus albus
Lj4g0009127 Lotus japonicus
Lj4g0018653 Lotus japonicus
Lj7A77T5 Lonicera japonica
Lj7C77T1 Lonicera japonica
Lsat_1_v5_gn_3_88661 Lactuca sativa
Manes.12G108400 Manihot esculenta
Mapoly0178s0017 Marchantia polymorpha
Mapoly0178s0018 Marchantia polymorpha
MCO03G407 Micromonas commoda
MCO09G374 Micromonas commoda
MD02G1178800 Malus domestica
Medtr4g094962 Medicago truncatula
Medtr8g072720 Medicago truncatula
MELO3C007585.2 Cucumis melo
Migut.H00394 Erythranthe guttata
MSTRG.2849 Avicennia marina
Nitab4.5_0002657g0010 Nicotiana tabacum
Nitab4.5_0003962g0030 Nicotiana tabacum
Nn1g04704 Nelumbo nucifera
Oeu037163.1 Olea europaea
Os01g0594800 Oryza sativa ssp. japonica
Os07g0155100 Oryza sativa ssp. japonica
Peaxi162Scf00365g00618 Petunia axillaris
PGR004G1079 Punica granatum
PGSC0003DMG400014873 Solanum tuberosum
Phvul.003G240300 Phaseolus vulgaris
Potri.005G060500 Populus trichocarpa
Pp3c14_12180 Physcomitrium patens
PRCOL_00002834 Prasinoderma coloniale
Prupe.6G229100 Prunus persica
Psat4g084360 Pisum sativum
PSO541G0377 Papaver somniferum
PSO675G2151 Papaver somniferum
QL06p040237 Quercus lobata
RcHm_v2.0_Chr2g0106661 Rosa chinensis
Rhsim10G0112600 Rhododendron simsii
Sabra05G0051000 Salix brachista
Sc16g0005220 Simmondsia chinensis
Sc16g0005230 Simmondsia chinensis
Sed0004561 Sechium edule
SEGI_01647 Sequoiadendron giganteum
SEGI_26559 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35788 Striga asiatica
SMO351G0208 Selaginella moellendorffii
SMO367G0384 Selaginella moellendorffii
Solyc03g044190.3 Solanum lycopersicum
Sopen03g008170 Solanum pennellii
Sp2g29370 Schrenkiella parvula
TAR381G0027 Trochodendron aralioides
TAR381G0285 Trochodendron aralioides
TAR625G0317 Trochodendron aralioides
TAR625G0863 Trochodendron aralioides
THA.LOC104819246 Tarenaya hassleriana
Thecc.01G063300 Theobroma cacao
Thhalv10004317m.g Eutrema salsugineum
TPR.G23863 Trifolium pratense
unitig_46.g18707 Utricularia gibba
vmacro05254 Vaccinium macrocarpon
VMungo0251G0564 Vigna mungo
Zm00001eb300250 Zea mays

User provided reference genes

Program Settings