Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19730 Brassica napus
A04p27260 Brassica napus
Aa31LG9G7550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis
Ah.16g108410 Amaranthus hybridus
AL4G31900 Arabidopsis lyrata
Aqoxy6G02013 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea
AT2G35790 Arabidopsis thaliana
ATR1159G074 Amborella trichopoda
Atru.chr12.670 Acer truncatum
Atru.chr12.697 Acer truncatum
AUR62020766 Chenopodium quinoa
AUR62027946 Chenopodium quinoa
BcaB01g03881 Brassica carinata
BcaB01g03882 Brassica carinata
BcaB06g28872 Brassica carinata
BcaC01g05707 Brassica carinata
BcaC02g07668 Brassica carinata
BolC4t27955H Brassica oleracea
BraA04t18224Z Brassica rapa
C03p22980 Brassica napus
C04p64770 Brassica napus
CAN.G694.84 Capsicum annuum
CANSAT56G3535 Cannabis sativa
CARHR130040 Cardamine hirsuta
Carub.0004s1755 Capsella rubella
Ca_04676_v3 Cicer arietinum L.
Cc02_g11390 Coffea canephora
CDE04G0636 Ceratophyllum demersum
CDE07G0610 Ceratophyllum demersum
CDE07G1130 Ceratophyllum demersum
Cfa001602 Carpinus fangiana
Ciclev10032614m.g Citrus clementina
CiPaw.01G275500 Carya illinoinensis
CiPaw.02G175700 Carya illinoinensis
ClCG09G020510 Citrullus lanatus
COL.COLO4_32034 Corchorus olitorius
Cpa.g.sc53.43 Carica papaya
Cre12.g540051 Chlamydomonas reinhardtii
CsaV3_5G025890 Cucumis sativus L.
CSS0000246 Camellia sinensis var. sinensis
Dinv11797 Davidia involucrata
Duzib114G0556 Durio zibethinus
ECA232G2854 Erigeron canadensis
EL10Ac2g03578 Beta vulgaris
Eucgr.J01110 Eucalyptus grandis
Eucgr.J01111 Eucalyptus grandis
FAN01G0973 Fragaria x ananassa
FAN03G1698 Fragaria x ananassa
FAN06G0212 Fragaria x ananassa
FAN10G0816 Fragaria x ananassa
FvH4_7g20020 Fragaria vesca
Glyma.17G183500 Glycine max
Gohir.A06G178200 Gossypium hirsutum
Gohir.D06G176800 Gossypium hirsutum
Gorai.010G204700 Gossypium raimondii
GSVIVG01016316001 Vitis vinifera
HanXRQChr09g0246501 Helianthus annuus
HanXRQChr10g0292531 Helianthus annuus
HanXRQChr17g0563371 Helianthus annuus
Haze_16926 Corylus avellana
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla
HPP92_003607 Vanilla planifolia
Hund19342 Selenicereus undatus
Lalb_Chr01g0010151 Lupinus albus
Lalb_Chr01g0010161 Lupinus albus
Lalb_Chr19g0129571 Lupinus albus
Lj2g0014971 Lotus japonicus
Lj8C97T4 Lonicera japonica
Lsat_1_v5_gn_9_67140 Lactuca sativa
Manes.07G103000 Manihot esculenta
Mapoly0033s0041 Marchantia polymorpha
Mapoly0033s0042 Marchantia polymorpha
MBI05_g11578_MAGBIO Magnolia biondii
MBI05_g11579_MAGBIO Magnolia biondii
MCO03G451 Micromonas commoda
MD01G1111700 Malus domestica
MD07G1177900 Malus domestica
Medtr6g033405 Medicago truncatula
MELO3C002879.2 Cucumis melo
Migut.F01989 Erythranthe guttata
MSTRG.373 Avicennia marina
Nitab4.5_0000233g0230 Nicotiana tabacum
Nitab4.5_0000476g0050 Nicotiana tabacum
Nitab4.5_0003072g0050 Nicotiana tabacum
Nitab4.5_0009003g0010 Nicotiana tabacum
Nitab4.5_0012288g0020 Nicotiana tabacum
Nn2g10688 Nelumbo nucifera
Nn2g13015 Nelumbo nucifera
Os03g0853800 Oryza sativa ssp. japonica
Peaxi162Scf00108g00166 Petunia axillaris
Peaxi162Scf00108g00173 Petunia axillaris
Peaxi162Scf01175g00023 Petunia axillaris
PGR044G2452 Punica granatum
PGSC0003DMG400023460 Solanum tuberosum
Phvul.004G075000 Phaseolus vulgaris
Potri.008G042800 Populus trichocarpa
Potri.010G219000 Populus trichocarpa
Potri.010G219400 Populus trichocarpa
Pp3c10_15170 Physcomitrium patens
Prupe.2G217200 Prunus persica
Psat1g099440 Pisum sativum
PSO339G2382 Papaver somniferum
PSO384G2564 Papaver somniferum
QL08p056659 Quercus lobata
RcHm_v2.0_Chr1g0363981 Rosa chinensis
Rhsim03G0123000 Rhododendron simsii
Rhsim09G0153300 Rhododendron simsii
Sabra08G0029500 Salix brachista
Sabra10G0169300 Salix brachista
SalBow3G1299 Salvia bowleyana
SalBow4G1295 Salvia bowleyana
Sc06g0001780 Simmondsia chinensis
Sed0011214 Sechium edule
Sed0019941 Sechium edule
SEGI_15078 Sequoiadendron giganteum
SGA_v2.0_scaffold28G12052 Striga asiatica
SMO239G0063 Selaginella moellendorffii
Solyc05g056090.3 Solanum lycopersicum
Sopen05g034500 Solanum pennellii
Sp4g18050 Schrenkiella parvula
TAR369G0086 Trochodendron aralioides
TAR633G2147 Trochodendron aralioides
TAR636G2049 Trochodendron aralioides
THA.LOC104802837 Tarenaya hassleriana
Thecc.10G069500 Theobroma cacao
Thhalv10017166m.g Eutrema salsugineum
TPR.G36634 Trifolium pratense
TWI38G1302 Tripterygium wilfordii
unitig_0.g529 Utricularia gibba
vmacro04884 Vaccinium macrocarpon
VMungo0464G0948 Vigna mungo
Zm00001eb064810 Zea mays

User provided reference genes

Program Settings