Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48990 Brassica napus
A09p58620 Brassica napus
Aa31LG6G16620 Aethionema arabicum
Aa31LG7G15690 Aethionema arabicum
Actinidia00628 Actinidia chinensis
Actinidia20518 Actinidia chinensis
Ah.01g023120 Amaranthus hybridus
AL4G10060 Arabidopsis lyrata
Aqoxy6G02106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea
AT2G20930 Arabidopsis thaliana
ATR0315G041 Amborella trichopoda
Atru.chr5.3380 Acer truncatum
AUR62003497 Chenopodium quinoa
AUR62010026 Chenopodium quinoa
AUR62013016 Chenopodium quinoa
AUR62017814 Chenopodium quinoa
BcaB08g34950 Brassica carinata
BcaC07g41181 Brassica carinata
BcaC07g41184 Brassica carinata
BcaNung01978 Brassica carinata
BolC7t46781H Brassica oleracea
BolC8t51754H Brassica oleracea
BraA06t27765Z Brassica rapa
BraA09t41249Z Brassica rapa
C07p63680 Brassica napus
C08p41910 Brassica napus
CAN.G588.89 Capsicum annuum
CANSAT25G1424 Cannabis sativa
CARHR111830 Cardamine hirsuta
CARHR173510 Cardamine hirsuta
CARHR174210 Cardamine hirsuta
Carub.0004s0002 Capsella rubella
Ca_08042_v3 Cicer arietinum L.
Cc09_g09830 Coffea canephora
CDE02G0259 Ceratophyllum demersum
Cfa005260 Carpinus fangiana
Ciclev10029529m.g Citrus clementina
CiPaw.05G083600 Carya illinoinensis
CiPaw.06G120900 Carya illinoinensis
ClCG02G003990 Citrullus lanatus
Cpa.g.sc20.100 Carica papaya
Cre03.g165650 Chlamydomonas reinhardtii
CsaV3_7G001110 Cucumis sativus L.
CSS0016500 Camellia sinensis var. sinensis
DCAR_003179 Daucus carota
DCAR_030423 Daucus carota
Dinv41928 Davidia involucrata
Duzib132G1056 Durio zibethinus
Duzib248G0128 Durio zibethinus
ECA233G5373 Erigeron canadensis
EL10Ac9g21356 Beta vulgaris
Eucgr.I01435 Eucalyptus grandis
FAN15G3340 Fragaria x ananassa
FAN20G0310 Fragaria x ananassa
FAN24G0830 Fragaria x ananassa
FAN27G1498 Fragaria x ananassa
FvH4_2g15500 Fragaria vesca
Glyma.09G245600 Glycine max
Glyma.18G247400 Glycine max
Gohir.A03G205500 Gossypium hirsutum
Gohir.D02G226800 Gossypium hirsutum
Gorai.005G254700 Gossypium raimondii
GSVIVG01024004001 Vitis vinifera
HanXRQChr03g0080211 Helianthus annuus
HanXRQChr05g0150591 Helianthus annuus
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla
HPP92_007243 Vanilla planifolia
HPP92_012947 Vanilla planifolia
Hund06443 Selenicereus undatus
Lalb_Chr21g0306961 Lupinus albus
Lj1g0014054 Lotus japonicus
Lsat_1_v5_gn_8_123161 Lactuca sativa
Manes.04G071800 Manihot esculenta
Mapoly0010s0009 Marchantia polymorpha
MBI12_g17551_MAGBIO Magnolia biondii
MCO02G011 Micromonas commoda
MD05G1123300 Malus domestica
MD10G1126300 Malus domestica
Medtr7g081040 Medicago truncatula
MELO3C013345.2 Cucumis melo
Migut.B00070 Erythranthe guttata
MSTRG.19983 Avicennia marina
Nitab4.5_0000079g0270 Nicotiana tabacum
Nitab4.5_0000283g0450 Nicotiana tabacum
Nitab4.5_0003698g0100 Nicotiana tabacum
Nn6g31939 Nelumbo nucifera
Oeu019918.2 Olea europaea
Oeu028973.1 Olea europaea
Os09g0541500 Oryza sativa ssp. japonica
Peaxi162Scf00362g00537 Petunia axillaris
PGR142G2796 Punica granatum
PGSC0003DMG400006181 Solanum tuberosum
Phvul.008G049900 Phaseolus vulgaris
Potri.004G176500 Populus trichocarpa
Potri.009G136800 Populus trichocarpa
Pp3c12_10830 Physcomitrium patens
Pp3c13_19460 Physcomitrium patens
PRCOL_00005825 Prasinoderma coloniale
Prupe.8G167200 Prunus persica
Psat3g100360 Pisum sativum
PSO541G0653 Papaver somniferum
PSO675G8512 Papaver somniferum
QL11p051049 Quercus lobata
RcHm_v2.0_Chr4g0392001 Rosa chinensis
RcHm_v2.0_Chr6g0278501 Rosa chinensis
Rhsim11G0192800 Rhododendron simsii
Sabra09G0106300 Salix brachista
SalBow1G8746 Salvia bowleyana
SalBow5G0288 Salvia bowleyana
SalBow5G2226 Salvia bowleyana
Sc18g0006380 Simmondsia chinensis
Sed0010745 Sechium edule
Sed0024195 Sechium edule
SEGI_29883 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05770 Striga asiatica
SGA_v2.0_scaffold199G41205 Striga asiatica
SGA_v2.0_scaffold80G25838 Striga asiatica
SMO228G0084 Selaginella moellendorffii
Solyc01g111690.3 Solanum lycopersicum
Sopen01g053730 Solanum pennellii
Sp4g00120 Schrenkiella parvula
Sp7g37220 Schrenkiella parvula
TAR376G1105 Trochodendron aralioides
THA.LOC104824758 Tarenaya hassleriana
Thecc.02G057800 Theobroma cacao
Thhalv10000369m.g Eutrema salsugineum
Thhalv10026520m.g Eutrema salsugineum
TPR.G32114 Trifolium pratense
TWI31G0315 Tripterygium wilfordii
TWI75G0361 Tripterygium wilfordii
unitig_0.g36 Utricularia gibba
vmacro02282 Vaccinium macrocarpon
VMungo1383G2472 Vigna mungo
Zm00001eb331790 Zea mays

User provided reference genes

Program Settings