Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G14570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis
Actinidia05457 Actinidia chinensis
Actinidia08051 Actinidia chinensis
Actinidia08052 Actinidia chinensis
Actinidia09624 Actinidia chinensis
Actinidia34019 Actinidia chinensis
Actinidia39795 Actinidia chinensis
Ah.02g130750 Amaranthus hybridus
Ah.02g130760 Amaranthus hybridus
Ah.03g135940 Amaranthus hybridus
AL6G23700 Arabidopsis lyrata
Aqoxy1G03766 Aquilegia oxysepala
Aqoxy3G01629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea
AT5G13100 Arabidopsis thaliana
ATR0579G080 Amborella trichopoda
ATR0582G145 Amborella trichopoda
Atru.chr11.2370 Acer truncatum
AUR62005654 Chenopodium quinoa
AUR62028899 Chenopodium quinoa
BcaB01g05377 Brassica carinata
BcaB03g14943 Brassica carinata
BcaB07g33260 Brassica carinata
BcaC04g19152 Brassica carinata
BolC9t59237H Brassica oleracea
BraA10t44572Z Brassica rapa
CAN.G163.3 Capsicum annuum
CANSAT80G0816 Cannabis sativa
CARHR200370 Cardamine hirsuta
Carub.0006s1127 Capsella rubella
Ca_07133_v3 Cicer arietinum L.
Ca_28122_v3 Cicer arietinum L.
CBR_g40425 Chara braunii
Cc11_g17240 Coffea canephora
CDE05G2516 Ceratophyllum demersum
CDE05G3530 Ceratophyllum demersum
Cfa009390 Carpinus fangiana
Ciclev10032000m.g Citrus clementina
CiPaw.05G106800 Carya illinoinensis
CiPaw.06G105500 Carya illinoinensis
ClCG07G015390 Citrullus lanatus
COL.COLO4_27347 Corchorus olitorius
Cpa.g.sc99.53 Carica papaya
Cpa.g.sc99.54 Carica papaya
CsaV3_4G002970 Cucumis sativus L.
CSS0036763 Camellia sinensis var. sinensis
CSS0038243 Camellia sinensis var. sinensis
DCAR_024659 Daucus carota
Dinv11693 Davidia involucrata
Dinv17591 Davidia involucrata
Duzib248G1308 Durio zibethinus
Duzib251G0174 Durio zibethinus
ECA234G1377 Erigeron canadensis
EL10Ac6g13540 Beta vulgaris
Eucgr.B03525 Eucalyptus grandis
FAN07G0693 Fragaria x ananassa
FAN12G1631 Fragaria x ananassa
FAN17G3098 Fragaria x ananassa
FvH4_4g23370 Fragaria vesca
Glyma.02G097000 Glycine max
Glyma.18G284500 Glycine max
Gohir.A04G100300 Gossypium hirsutum
Gohir.D04G139300 Gossypium hirsutum
Gorai.012G124400 Gossypium raimondii
GSVIVG01000906001 Vitis vinifera
GSVIVG01010535001 Vitis vinifera
HanXRQChr17g0568911 Helianthus annuus
Haze_12451 Corylus avellana
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla
HPP92_011533 Vanilla planifolia
HPP92_011539 Vanilla planifolia
Hund06107 Selenicereus undatus
Lalb_Chr10g0092021 Lupinus albus
Lalb_Chr17g0336391 Lupinus albus
Lj1g0000862 Lotus japonicus
Lj6A830T28 Lonicera japonica
Lsat_1_v5_gn_4_280 Lactuca sativa
Manes.12G008200 Manihot esculenta
Manes.13G008600 Manihot esculenta
Mapoly0015s0197 Marchantia polymorpha
MBI04_g07882_MAGBIO Magnolia biondii
MBI07_g18747_MAGBIO Magnolia biondii
MD16G1123300 Malus domestica
Medtr7g022390 Medicago truncatula
MELO3C017746.2 Cucumis melo
Migut.E00005 Erythranthe guttata
MSTRG.481 Avicennia marina
Nitab4.5_0000251g0050 Nicotiana tabacum
Nitab4.5_0002277g0010 Nicotiana tabacum
Nn3g16394 Nelumbo nucifera
Nn4g22254 Nelumbo nucifera
Oeu012651.1 Olea europaea
Os01g0102500 Oryza sativa ssp. japonica
Peaxi162Scf00128g01523 Petunia axillaris
PGR102G0765 Punica granatum
PGSC0003DMG400010801 Solanum tuberosum
Phvul.008G017000 Phaseolus vulgaris
Potri.001G059700 Populus trichocarpa
Potri.003G168300 Populus trichocarpa
Prupe.1G222300 Prunus persica
Psat3g187080 Pisum sativum
PSO017G1106 Papaver somniferum
PSO478G0501 Papaver somniferum
QL03p051598 Quercus lobata
QL06p005212 Quercus lobata
RcHm_v2.0_Chr4g0429761 Rosa chinensis
Rhsim12G0023600 Rhododendron simsii
Sabra01G0042800 Salix brachista
Sabra03G0123400 Salix brachista
SalBow2G0527 Salvia bowleyana
Sc04g0010310 Simmondsia chinensis
Sed0011472 Sechium edule
Sed0014060 Sechium edule
SEGI_28374 Sequoiadendron giganteum
SEGI_34677 Sequoiadendron giganteum
SMO367G0614 Selaginella moellendorffii
Solyc05g015980.3 Solanum lycopersicum
Sopen05g011970 Solanum pennellii
Sp6g30880 Schrenkiella parvula
TAR371G0171 Trochodendron aralioides
TAR629G3099 Trochodendron aralioides
THA.LOC104810209 Tarenaya hassleriana
Thecc.02G201300 Theobroma cacao
Thhalv10013944m.g Eutrema salsugineum
TPR.G2946 Trifolium pratense
TWI36G1544 Tripterygium wilfordii
TWI75G1512 Tripterygium wilfordii
unitig_26.g10416 Utricularia gibba
unitig_8.g2899 Utricularia gibba
unitig_8.g2900 Utricularia gibba
vmacro01046 Vaccinium macrocarpon
VMungo1215G2942 Vigna mungo
VMungo1383G3355 Vigna mungo
Zm00001eb127020 Zea mays

User provided reference genes

Program Settings