Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18200 Brassica napus
A03p57030 Brassica napus
Aa31LG3G10790 Aethionema arabicum
Aa31LG5G10350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.646 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2023 Anthoceros agrestis
Actinidia10725 Actinidia chinensis
Actinidia35335 Actinidia chinensis
Ah.06g186400 Amaranthus hybridus
AL7G25790 Arabidopsis lyrata
Aqoxy7G03212 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A1QMDX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G9AZJ3 Arachis hypogaea
AT4G27040 Arabidopsis thaliana
ATR0749G094 Amborella trichopoda
AUR62015738 Chenopodium quinoa
AUR62020473 Chenopodium quinoa
BcaC06g32714 Brassica carinata
BcaC09g50622 Brassica carinata
BolC1t02251H Brassica oleracea
BolC1t02253H Brassica oleracea
BolC7t46008H Brassica oleracea
BraA01t01775Z Brassica rapa
BraA03t14772Z Brassica rapa
C01p23160 Brassica napus
C01p23200 Brassica napus
C07p55040 Brassica napus
CAN.G1192.5 Capsicum annuum
CAN.G1781.5 Capsicum annuum
CAN.G915.10 Capsicum annuum
CANSAT21G0158 Cannabis sativa
CARHR234690 Cardamine hirsuta
Carub.0007s1380 Capsella rubella
Ca_14720_v3 Cicer arietinum L.
CBR_g28043 Chara braunii
Cc05_g13580 Coffea canephora
CDE08G1370 Ceratophyllum demersum
Cfa020373 Carpinus fangiana
Cfa026637 Carpinus fangiana
Ciclev10009283m.g Citrus clementina
CiPaw.12G128600 Carya illinoinensis
ClCG10G005500 Citrullus lanatus
COL.COLO4_09643 Corchorus olitorius
Cpa.g.sc97.28 Carica papaya
Cre17.g706650 Chlamydomonas reinhardtii
CsaV3_3G005220 Cucumis sativus L.
Dinv22273 Davidia involucrata
Dinv40739 Davidia involucrata
Duzib170G0103 Durio zibethinus
Duzib213G0140 Durio zibethinus
ECA236G3763 Erigeron canadensis
EL10Ac4g07848 Beta vulgaris
Eucgr.F03458 Eucalyptus grandis
FAN11G1729 Fragaria x ananassa
FAN16G3416 Fragaria x ananassa
FAN21G0196 Fragaria x ananassa
FvH4_3g22390 Fragaria vesca
Glyma.08G314600 Glycine max
Glyma.18G099600 Glycine max
Gohir.A01G078600 Gossypium hirsutum
Gohir.D01G065700 Gossypium hirsutum
Gorai.002G087600 Gossypium raimondii
GSVIVG01037615001 Vitis vinifera
GSVIVG01037618001 Vitis vinifera
GSVIVG01037619001 Vitis vinifera
HanXRQChr09g0268041 Helianthus annuus
HanXRQChr11g0336331 Helianthus annuus
Haze_09656 Corylus avellana
Hma1.2p1_0212F.1_g090110 Hydrangea macrophylla
Hma1.2p1_0673F.1_g201210 Hydrangea macrophylla
HPP92_001822 Vanilla planifolia
Lalb_Chr06g0171921 Lupinus albus
Lj1A870G92 Lonicera japonica
Lj6g0016495 Lotus japonicus
Lsat_1_v5_gn_7_109480 Lactuca sativa
Manes.03G124800 Manihot esculenta
Manes.15G073300 Manihot esculenta
Mapoly0007s0150 Marchantia polymorpha
MBI15_g26086_MAGBIO Magnolia biondii
MCO16G427 Micromonas commoda
MD03G1205400 Malus domestica
MD11G1221300 Malus domestica
Medtr3g051210 Medicago truncatula
Medtr7g033650 Medicago truncatula
MELO3C031910.2 Cucumis melo
MELO3C032233.2 Cucumis melo
Migut.H01837 Erythranthe guttata
MSTRG.12968 Avicennia marina
Nitab4.5_0001393g0150 Nicotiana tabacum
Nitab4.5_0005048g0050 Nicotiana tabacum
Nn8g40268 Nelumbo nucifera
Oeu062595.4 Olea europaea
Os09g0529700 Oryza sativa ssp. japonica
Os11g0670700 Oryza sativa ssp. japonica
Peaxi162Scf00387g00210 Petunia axillaris
PGR031G1629 Punica granatum
PGR142G1953 Punica granatum
PGSC0003DMG400014423 Solanum tuberosum
Phvul.006G040700 Phaseolus vulgaris
Potri.001G424600 Populus trichocarpa
Pp3c10_13560 Physcomitrium patens
PRCOL_00005955 Prasinoderma coloniale
Prupe.4G210400 Prunus persica
Prupe.5G052500 Prunus persica
Psat5g180640 Pisum sativum
PSO017G1132 Papaver somniferum
PSO170G3986 Papaver somniferum
QL08p011467 Quercus lobata
QL08p011589 Quercus lobata
QL09p032912 Quercus lobata
RcHm_v2.0_Chr5g0039061 Rosa chinensis
Sabra11G0123400 Salix brachista
Sabra16G0288400 Salix brachista
Sc16g0006290 Simmondsia chinensis
Sed0015085 Sechium edule
SEGI_13452 Sequoiadendron giganteum
SEGI_16862 Sequoiadendron giganteum
SEGI_35638 Sequoiadendron giganteum
SEGI_36060 Sequoiadendron giganteum
SGA_v2.0_scaffold9G05066 Striga asiatica
SMO232G0102 Selaginella moellendorffii
Solyc10g006320.3 Solanum lycopersicum
Sopen10g002270 Solanum pennellii
Sp7g25020 Schrenkiella parvula
TAR383G0098 Trochodendron aralioides
TAR626G0395 Trochodendron aralioides
TAR626G1586 Trochodendron aralioides
THA.LOC104817661 Tarenaya hassleriana
Thecc.07G042900 Theobroma cacao
Thhalv10014489m.g Eutrema salsugineum
Thhalv10026070m.g Eutrema salsugineum
TPR.G16583 Trifolium pratense
TWI38G0783 Tripterygium wilfordii
vmacro09729 Vaccinium macrocarpon
VMungo0540G0423 Vigna mungo
Zm00001eb103240 Zea mays

User provided reference genes

Program Settings