Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08000 Brassica napus
Aa31LG1G3330 Aethionema arabicum
Actinidia24049 Actinidia chinensis
Ah.09g236340 Amaranthus hybridus
AL1G22470 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1EQ2T2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3SD72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NC80VA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YX67LP Arachis hypogaea
AT1G11380 Arabidopsis thaliana
ATR1132G083 Amborella trichopoda
Atru.chr10.2035 Acer truncatum
AUR62012512 Chenopodium quinoa
AUR62014686 Chenopodium quinoa
BcaC05g25012 Brassica carinata
BolC5t29702H Brassica oleracea
BraA06t23999Z Brassica rapa
C05p09600 Brassica napus
CAN.G424.37 Capsicum annuum
CANSAT56G4448 Cannabis sativa
CARHR011620 Cardamine hirsuta
Carub.0001s1101 Capsella rubella
Ca_00226_v3 Cicer arietinum L.
Ca_18471_v3 Cicer arietinum L.
CBR_g34304 Chara braunii
CBR_g50374 Chara braunii
CBR_g51429 Chara braunii
CBR_g51444 Chara braunii
CBR_g51446 Chara braunii
Cc02_g12200 Coffea canephora
CDE02G0678 Ceratophyllum demersum
CDE05G0673 Ceratophyllum demersum
Ciclev10016376m.g Citrus clementina
CiPaw.09G156400 Carya illinoinensis
CiPaw.10G115800 Carya illinoinensis
ClCG01G022390 Citrullus lanatus
COL.COLO4_31635 Corchorus olitorius
Cpa.g.sc27.157 Carica papaya
CsaV3_6G049570 Cucumis sativus L.
CSS0013005 Camellia sinensis var. sinensis
CSS0013141 Camellia sinensis var. sinensis
DCAR_004160 Daucus carota
Dinv40458 Davidia involucrata
Duzib192G0920 Durio zibethinus
Duzib235G0662 Durio zibethinus
ECA236G4035 Erigeron canadensis
EL10Ac8g19981 Beta vulgaris
Eucgr.E03677 Eucalyptus grandis
FAN11G3671 Fragaria x ananassa
FAN16G0586 Fragaria x ananassa
FAN21G2210 Fragaria x ananassa
FAN25G1197 Fragaria x ananassa
FvH4_3g03670 Fragaria vesca
Glyma.07G188900 Glycine max
Glyma.08G060400 Glycine max
Glyma.13G247700 Glycine max
Glyma.15G066100 Glycine max
Gohir.A05G166700 Gossypium hirsutum
Gohir.A10G019100 Gossypium hirsutum
Gohir.D05G169700 Gossypium hirsutum
Gohir.D10G020000 Gossypium hirsutum
Gorai.009G174900 Gossypium raimondii
Gorai.011G021200 Gossypium raimondii
GSVIVG01003677001 Vitis vinifera
HanXRQChr15g0482541 Helianthus annuus
Haze_06612 Corylus avellana
HPP92_000912 Vanilla planifolia
Hund21293 Selenicereus undatus
Hund23579 Selenicereus undatus
Lalb_Chr05g0218101 Lupinus albus
Lalb_Chr09g0327231 Lupinus albus
Lalb_Chr18g0060021 Lupinus albus
Lj1A1216T22 Lonicera japonica
Lj2A278T71 Lonicera japonica
Lj4g0024466 Lotus japonicus
Lj6g0011505 Lotus japonicus
Lsat_1_v5_gn_7_20320 Lactuca sativa
Manes.16G019184 Manihot esculenta
Manes.17G032900 Manihot esculenta
MBI02_g38754_MAGBIO Magnolia biondii
MBI02_g46153_MAGBIO Magnolia biondii
MD05G1328900 Malus domestica
MD10G1305800 Malus domestica
Medtr2g011490 Medicago truncatula
Medtr4g091550 Medicago truncatula
Medtr8g446760 Medicago truncatula
MELO3C007336.2 Cucumis melo
Migut.H01529 Erythranthe guttata
Migut.M01228 Erythranthe guttata
MSTRG.7277 Avicennia marina
Nitab4.5_0000649g0210 Nicotiana tabacum
Nitab4.5_0005620g0030 Nicotiana tabacum
Nn1g03823 Nelumbo nucifera
Oeu021580.1 Olea europaea
Peaxi162Scf01035g00114 Petunia axillaris
PGR042G1297 Punica granatum
PGSC0003DMG400022348 Solanum tuberosum
Phvul.002G220600 Phaseolus vulgaris
Phvul.006G193600 Phaseolus vulgaris
Potri.004G026700 Populus trichocarpa
Potri.011G040100 Populus trichocarpa
Pp3c18_19760 Physcomitrium patens
Pp3c21_1800 Physcomitrium patens
Prupe.4G033900 Prunus persica
Prupe.5G244100 Prunus persica
Psat1g209480 Pisum sativum
Psat1g209520 Pisum sativum
PSO541G3127 Papaver somniferum
PSO675G7592 Papaver somniferum
QL05p080525 Quercus lobata
RcHm_v2.0_Chr5g0005711 Rosa chinensis
Rhsim02G0118200 Rhododendron simsii
Rhsim02G0118400 Rhododendron simsii
Sc17g0006760 Simmondsia chinensis
Sed0004151 Sechium edule
Sed0027497 Sechium edule
SGA_v2.0_scaffold114G31992 Striga asiatica
SGA_v2.0_scaffold42G16089 Striga asiatica
Solyc02g079390.4 Solanum lycopersicum
Sopen02g024190 Solanum pennellii
Sp1g10010 Schrenkiella parvula
Sp2g25370 Schrenkiella parvula
TAR626G0062 Trochodendron aralioides
TAR627G0612 Trochodendron aralioides
TAR629G2478 Trochodendron aralioides
TAR629G3446 Trochodendron aralioides
THA.LOC104818970 Tarenaya hassleriana
Thecc.06G202400 Theobroma cacao
TPR.G15376 Trifolium pratense
TPR.G36735 Trifolium pratense
TWI38G0326 Tripterygium wilfordii
unitig_748.g7566 Utricularia gibba
vmacro15855 Vaccinium macrocarpon
VMungo0251G1023 Vigna mungo
VMungo0540G1177 Vigna mungo
Zm00001eb323790 Zea mays

User provided reference genes

Program Settings