Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p29780 Brassica napus
A05p29790 Brassica napus
Aa31LG8G6560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis
Actinidia04079 Actinidia chinensis
Ah.14g085910 Amaranthus hybridus
AL3G33230 Arabidopsis lyrata
Aqoxy2G03797 Aquilegia oxysepala
Aqoxy2G03805 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea
AT3G19780 Arabidopsis thaliana
ATR0618G435 Amborella trichopoda
Atru.chr11.1182 Acer truncatum
AUR62018178 Chenopodium quinoa
AUR62038663 Chenopodium quinoa
BcaB06g26047 Brassica carinata
BcaC05g28407 Brassica carinata
BcaC05g28408 Brassica carinata
BcaC05g28416 Brassica carinata
BcaC05g28417 Brassica carinata
BolC5t33225H Brassica oleracea
BraA05t21816Z Brassica rapa
BraA05t21829Z Brassica rapa
C05p44840 Brassica napus
C05p44920 Brassica napus
C05p45010 Brassica napus
CAN.G157.16 Capsicum annuum
CAN.G157.17 Capsicum annuum
CANSAT64G0530 Cannabis sativa
CARHR095290 Cardamine hirsuta
CARHR095300 Cardamine hirsuta
Carub.0003s1966 Capsella rubella
Ca_03025_v3 Cicer arietinum L.
Ca_31353_v3 Cicer arietinum L.
CBR_g66815 Chara braunii
Cc11_g00090 Coffea canephora
Cc11_g00100 Coffea canephora
Cc11_g04390 Coffea canephora
CDE04G1313 Ceratophyllum demersum
CDE04G1407 Ceratophyllum demersum
Cfa008712 Carpinus fangiana
Ciclev10030666m.g Citrus clementina
CiPaw.05G167300 Carya illinoinensis
ClCG09G004600 Citrullus lanatus
COL.COLO4_08119 Corchorus olitorius
COL.COLO4_08120 Corchorus olitorius
CsaV3_7G030540 Cucumis sativus L.
CSS0001307 Camellia sinensis var. sinensis
CSS0026201 Camellia sinensis var. sinensis
CSS0028316 Camellia sinensis var. sinensis
CSS0031646 Camellia sinensis var. sinensis
DCAR_002567 Daucus carota
Dinv11710 Davidia involucrata
Dinv11711 Davidia involucrata
Duzib052G0545 Durio zibethinus
Duzib132G1218 Durio zibethinus
ECA246G2025 Erigeron canadensis
EL10Ac9g20684 Beta vulgaris
Eucgr.J00855 Eucalyptus grandis
FAN07G1253 Fragaria x ananassa
FAN17G1521 Fragaria x ananassa
FvH4_4g15932 Fragaria vesca
FvH4_4g36771 Fragaria vesca
FvH4_5g30901 Fragaria vesca
FvH4_6g37553 Fragaria vesca
Glyma.11G102200 Glycine max
Gohir.A13G059600 Gossypium hirsutum
Gohir.D13G062400 Gossypium hirsutum
Gorai.013G070900 Gossypium raimondii
GSVIVG01010197001 Vitis vinifera
HanXRQChr17g0540811 Helianthus annuus
Haze_11722 Corylus avellana
Hma1.2p1_0499F.1_g166820 Hydrangea macrophylla
HPP92_008562 Vanilla planifolia
HPP92_008566 Vanilla planifolia
HPP92_008567 Vanilla planifolia
Hund13152 Selenicereus undatus
Lalb_Chr01g0001491 Lupinus albus
Lj3g0015709 Lotus japonicus
Lj6A721G56 Lonicera japonica
Lsat_1_v5_gn_3_33580 Lactuca sativa
Lsat_1_v5_gn_4_136001 Lactuca sativa
Manes.11G108701 Manihot esculenta
MD13G1007100 Malus domestica
Medtr4g074610 Medicago truncatula
MELO3C023602.2 Cucumis melo
Migut.L00859 Erythranthe guttata
MSTRG.433 Avicennia marina
Nitab4.5_0000139g0140 Nicotiana tabacum
Nitab4.5_0000139g0150 Nicotiana tabacum
Nitab4.5_0002392g0020 Nicotiana tabacum
Nitab4.5_0002392g0030 Nicotiana tabacum
Nitab4.5_0028170g0010 Nicotiana tabacum
Nn4g24940 Nelumbo nucifera
Oeu033538.1 Olea europaea
Os10g0485100 Oryza sativa ssp. japonica
Peaxi162Scf00363g00073 Petunia axillaris
Peaxi162Scf00363g00730 Petunia axillaris
PGR044G2237 Punica granatum
Phvul.011G031200 Phaseolus vulgaris
Potri.007G070400 Populus trichocarpa
Pp3c7_6630 Physcomitrium patens
Prupe.1G345800 Prunus persica
Psat4g043640 Pisum sativum
Psat5g212920 Pisum sativum
Psat7g173480 Pisum sativum
PSO063G1542 Papaver somniferum
PSO782G3049 Papaver somniferum
QL03p043857 Quercus lobata
RcHm_v2.0_Chr4g0446491 Rosa chinensis
Rhsim09G0074000 Rhododendron simsii
Sabra07G0059000 Salix brachista
Sabra07G0059100 Salix brachista
SalBow2G1379 Salvia bowleyana
Sc06g0007890 Simmondsia chinensis
Sed0007950 Sechium edule
SEGI_38899 Sequoiadendron giganteum
SHI13892 Sapria himalayana
SHI13893 Sapria himalayana
SHI13894 Sapria himalayana
Solyc02g055460.3 Solanum lycopersicum
Solyc02g055470.2 Solanum lycopersicum
Sopen02g009170 Solanum pennellii
Sopen02g009200 Solanum pennellii
Sp3g17800 Schrenkiella parvula
TAR622G0093 Trochodendron aralioides
THA.LOC104826522 Tarenaya hassleriana
Thecc.02G161600 Theobroma cacao
Thhalv10019965m.g Eutrema salsugineum
TPR.G32358 Trifolium pratense
TWI74G0147 Tripterygium wilfordii
unitig_699.g19973 Utricularia gibba
vmacro10900 Vaccinium macrocarpon
VMungo1127G0377 Vigna mungo
Zm00001eb221340 Zea mays

User provided reference genes

Program Settings