Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20010 Brassica napus
Aa31LG5G21440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis
Actinidia05440 Actinidia chinensis
Actinidia14313 Actinidia chinensis
Ah.08g210640 Amaranthus hybridus
AL4G32420 Arabidopsis lyrata
Aqoxy4G02804 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea
AT2G36305 Arabidopsis thaliana
ATR0081G033 Amborella trichopoda
ATR0568G150 Amborella trichopoda
Atru.chr8.1566 Acer truncatum
AUR62028549 Chenopodium quinoa
AUR62028550 Chenopodium quinoa
AUR62033501 Chenopodium quinoa
AUR62033502 Chenopodium quinoa
BcaB01g03852 Brassica carinata
BcaC01g05669 Brassica carinata
BolC3t14741H Brassica oleracea
BraA03t11252Z Brassica rapa
C03p23450 Brassica napus
CAN.G397.28 Capsicum annuum
CANSAT80G1368 Cannabis sativa
CARHR130580 Cardamine hirsuta
Carub.0004s1806 Capsella rubella
Ca_26654_v3 Cicer arietinum L.
CBR_g961 Chara braunii
Cc06_g05640 Coffea canephora
CDE02G3258 Ceratophyllum demersum
Ciclev10012247m.g Citrus clementina
CiPaw.09G012600 Carya illinoinensis
ClCG10G019090 Citrullus lanatus
COL.COLO4_29768 Corchorus olitorius
Cre01.g042150 Chlamydomonas reinhardtii
CsaV3_3G037160 Cucumis sativus L.
CSS0002811 Camellia sinensis var. sinensis
DCAR_009157 Daucus carota
Dinv21221 Davidia involucrata
Dinv31674 Davidia involucrata
Duzib093G1300 Durio zibethinus
ECA248G1272 Erigeron canadensis
EL10Ac7g16934 Beta vulgaris
Eucgr.A01508 Eucalyptus grandis
FAN02G2684 Fragaria x ananassa
FAN05G0675 Fragaria x ananassa
FAN05G4213 Fragaria x ananassa
FAN14G3109 Fragaria x ananassa
FvH4_6g18450 Fragaria vesca
Glyma.10G071200 Glycine max
Glyma.13G153052 Glycine max
Gohir.A04G063700 Gossypium hirsutum
Gohir.D04G100800 Gossypium hirsutum
Gohir.D09G135950 Gossypium hirsutum
Gorai.006G155900 Gossypium raimondii
Gorai.009G404000 Gossypium raimondii
GSVIVG01033827001 Vitis vinifera
HanXRQChr01g0029231 Helianthus annuus
HanXRQChr08g0222721 Helianthus annuus
HanXRQChr10g0313891 Helianthus annuus
HanXRQChr10g0313901 Helianthus annuus
HanXRQChr10g0313971 Helianthus annuus
HanXRQChr10g0313981 Helianthus annuus
HanXRQChr10g0314001 Helianthus annuus
HanXRQChr10g0314011 Helianthus annuus
HanXRQChr10g0314031 Helianthus annuus
HanXRQChr11g0340241 Helianthus annuus
HanXRQChr13g0424671 Helianthus annuus
HanXRQChr13g0424691 Helianthus annuus
Haze_19592 Corylus avellana
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla
HPP92_006355 Vanilla planifolia
Lalb_Chr21g0315771 Lupinus albus
Lj2A135G55 Lonicera japonica
Lj2A135T55 Lonicera japonica
Lj5g0006681 Lotus japonicus
Lj9A526G37 Lonicera japonica
Lsat_1_v5_gn_1_48021 Lactuca sativa
Lsat_1_v5_gn_1_48041 Lactuca sativa
Manes.09G056451 Manihot esculenta
Mapoly0066s0044 Marchantia polymorpha
MCO10G317 Micromonas commoda
MD12G1023600 Malus domestica
MD14G1020800 Malus domestica
Medtr1g060300 Medicago truncatula
MELO3C009462.2 Cucumis melo
Migut.J01051 Erythranthe guttata
MSTRG.5837 Avicennia marina
Nitab4.5_0001725g0030 Nicotiana tabacum
Nitab4.5_0002400g0100 Nicotiana tabacum
Nn6g34939 Nelumbo nucifera
Oeu047193.1 Olea europaea
Os05g0357700 Oryza sativa ssp. japonica
Peaxi162Scf00040g01117 Petunia axillaris
PGR004G0569 Punica granatum
PGSC0003DMG401002654 Solanum tuberosum
Phvul.007G229100 Phaseolus vulgaris
Potri.006G083300 Populus trichocarpa
Pp3c4_17190 Physcomitrium patens
PRCOL_00001551 Prasinoderma coloniale
Prupe.7G112900 Prunus persica
Psat6g080840 Pisum sativum
PSO339G3946 Papaver somniferum
PSO384G2019 Papaver somniferum
QL07p039311 Quercus lobata
RcHm_v2.0_Chr3g0472981 Rosa chinensis
Rhsim03G0076400 Rhododendron simsii
Sabra06G0062900 Salix brachista
SalBow3G2040 Salvia bowleyana
Sc02g0000910 Simmondsia chinensis
Sed0004661 Sechium edule
Sed0012745 Sechium edule
SEGI_00479 Sequoiadendron giganteum
SEGI_36814 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06736 Striga asiatica
SHI23954 Sapria himalayana
SMO203G0038 Selaginella moellendorffii
SMO327G0022 Selaginella moellendorffii
Solyc09g009630.3 Solanum lycopersicum
Sopen09g004390 Solanum pennellii
Sp4g18530 Schrenkiella parvula
TAR633G0672 Trochodendron aralioides
TAR636G2700 Trochodendron aralioides
THA.LOC104807091 Tarenaya hassleriana
Thecc.05G087100 Theobroma cacao
Thhalv10016950m.g Eutrema salsugineum
TPR.G31118 Trifolium pratense
TWI53G0317 Tripterygium wilfordii
TWI77G0106 Tripterygium wilfordii
unitig_26.g9252 Utricularia gibba
unitig_749.g14296 Utricularia gibba
vmacro07401 Vaccinium macrocarpon
VMungo0720G0655 Vigna mungo
Zm00001eb285910 Zea mays

User provided reference genes

Program Settings