Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36100 Brassica napus
Aa31LG3G1740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2951 Anthoceros agrestis
Actinidia13809 Actinidia chinensis
Actinidia29156 Actinidia chinensis
AL3G20360 Arabidopsis lyrata
Aqoxy5G03828 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2N10NB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J12K19 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WQ4JXZ Arachis hypogaea
AT3G09250 Arabidopsis thaliana
ATR0950G003 Amborella trichopoda
Atru.chr10.1066 Acer truncatum
Atru.chr8.2154 Acer truncatum
AUR62034588 Chenopodium quinoa
AUR62036679 Chenopodium quinoa
BcaB04g18542 Brassica carinata
BcaC01g04218 Brassica carinata
BcaC09g48013 Brassica carinata
BcaC09g48059 Brassica carinata
BolC1t05468H Brassica oleracea
BraA01t04309Z Brassica rapa
BraA03t12780Z Brassica rapa
BraA03t12781Z Brassica rapa
C03p43750 Brassica napus
C03p43760 Brassica napus
CAN.G351.19 Capsicum annuum
CAN.G978.9 Capsicum annuum
CANSAT35G1374 Cannabis sativa
CARHR083600 Cardamine hirsuta
Carub.0003s0836 Capsella rubella
Ca_07382_v3 Cicer arietinum L.
Cc06_g01940 Coffea canephora
CDE04G3656 Ceratophyllum demersum
Ciclev10012485m.g Citrus clementina
CiPaw.09G203400 Carya illinoinensis
CiPaw.10G150900 Carya illinoinensis
ClCG10G021640 Citrullus lanatus
COL.COLO4_14664 Corchorus olitorius
Cpa.g.sc56.75 Carica papaya
Cre08.g375950 Chlamydomonas reinhardtii
CsaV3_3G034370 Cucumis sativus L.
CSS0033766 Camellia sinensis var. sinensis
DCAR_024047 Daucus carota
Dinv35535 Davidia involucrata
Dinv37103 Davidia involucrata
Duzib093G0236 Durio zibethinus
ECA247G1252 Erigeron canadensis
EL10Ac7g17156 Beta vulgaris
Eucgr.F01481 Eucalyptus grandis
FAN02G1041 Fragaria x ananassa
FAN05G5175 Fragaria x ananassa
FAN09G2081 Fragaria x ananassa
FAN14G5852 Fragaria x ananassa
FvH4_6g12490 Fragaria vesca
Glyma.01G107100 Glycine max
Glyma.03G073762 Glycine max
Gohir.A09G162000 Gossypium hirsutum
Gohir.A10G229920 Gossypium hirsutum
Gohir.A10G232501 Gossypium hirsutum
Gohir.D09G157600 Gossypium hirsutum
Gohir.D10G244900 Gossypium hirsutum
Gorai.006G179300 Gossypium raimondii
Gorai.011G282300 Gossypium raimondii
GSVIVG01034046001 Vitis vinifera
HanXRQChr06g0176661 Helianthus annuus
HanXRQChr10g0292601 Helianthus annuus
Haze_20910 Corylus avellana
Hma1.2p1_0671F.1_g200690 Hydrangea macrophylla
HPP92_006850 Vanilla planifolia
HPP92_006867 Vanilla planifolia
Hund26016 Selenicereus undatus
Lalb_Chr07g0193171 Lupinus albus
Lj3g0016116 Lotus japonicus
Lj3P959T33 Lonicera japonica
Lsat_1_v5_gn_9_29260 Lactuca sativa
Manes.07G057000 Manihot esculenta
Manes.09G099500 Manihot esculenta
MBI14_g25115_MAGBIO Magnolia biondii
MBI14_g45810_MAGBIO Magnolia biondii
MCO04G552 Micromonas commoda
MD04G1141800 Malus domestica
MD12G1156400 Malus domestica
Medtr4g019910 Medicago truncatula
MELO3C009208.2 Cucumis melo
Migut.J00254 Erythranthe guttata
MSTRG.5615 Avicennia marina
Nitab4.5_0000008g0300 Nicotiana tabacum
Nitab4.5_0000119g0350 Nicotiana tabacum
Nitab4.5_0002152g0020 Nicotiana tabacum
Nitab4.5_0010516g0020 Nicotiana tabacum
Nitab4.5_0010516g0030 Nicotiana tabacum
Nn2g13550 Nelumbo nucifera
Oeu039148.1 Olea europaea
Os01g0753200 Oryza sativa ssp. japonica
Os02g0788500 Oryza sativa ssp. japonica
Peaxi162Scf00014g01419 Petunia axillaris
PGR044G0692 Punica granatum
PGSC0003DMG400019135 Solanum tuberosum
PGSC0003DMG400020340 Solanum tuberosum
Phvul.006G070400 Phaseolus vulgaris
Phvul.006G070500 Phaseolus vulgaris
Potri.006G093700 Populus trichocarpa
Potri.016G105600 Populus trichocarpa
PRCOL_00005263 Prasinoderma coloniale
PRCOL_00006744 Prasinoderma coloniale
Prupe.6G267200 Prunus persica
Psat3g035960 Pisum sativum
Psat7g240360 Pisum sativum
PSO339G5656 Papaver somniferum
PSO384G2457 Papaver somniferum
QL07p027771 Quercus lobata
RcHm_v2.0_Chr3g0464311 Rosa chinensis
Rhsim05G0201000 Rhododendron simsii
Sabra06G0071200 Salix brachista
Sc01g0004980 Simmondsia chinensis
Sed0009323 Sechium edule
SEGI_35617 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24983 Striga asiatica
SHI12750 Sapria himalayana
SMO143G0113 Selaginella moellendorffii
Solyc09g011730.4 Solanum lycopersicum
Sopen09g006550 Solanum pennellii
Sp3g07630 Schrenkiella parvula
TAR633G1417 Trochodendron aralioides
THA.LOC104823270 Tarenaya hassleriana
Thecc.05G026500 Theobroma cacao
Thhalv10021409m.g Eutrema salsugineum
TPR.G2978 Trifolium pratense
TPR.G339 Trifolium pratense
TWI77G0370 Tripterygium wilfordii
unitig_27.g24805 Utricularia gibba
vmacro20204 Vaccinium macrocarpon
VMungo0540G0241 Vigna mungo
Zm00001eb257420 Zea mays
Zm00001eb370820 Zea mays

User provided reference genes

Program Settings