Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17690 Brassica napus
A03p56710 Brassica napus
Aa31LG5G11790 Aethionema arabicum
Actinidia30345 Actinidia chinensis
Actinidia33104 Actinidia chinensis
Ah.04g166380 Amaranthus hybridus
AL7G26500 Arabidopsis lyrata
Aqoxy1G04294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea
AT4G26450 Arabidopsis thaliana
ATR0021G035 Amborella trichopoda
Atru.chr2.3903 Acer truncatum
AUR62015929 Chenopodium quinoa
AUR62017309 Chenopodium quinoa
AUR62040680 Chenopodium quinoa
BcaC06g32747 Brassica carinata
BcaC09g50709 Brassica carinata
BolC1t02167H Brassica oleracea
BolC7t45979H Brassica oleracea
BraA01t01725Z Brassica rapa
BraA03t14741Z Brassica rapa
C01p22360 Brassica napus
C07p54910 Brassica napus
CAN.G492.59 Capsicum annuum
CAN.G8.46 Capsicum annuum
CANSAT11G1251 Cannabis sativa
CARHR234010 Cardamine hirsuta
Carub.0007s1448 Capsella rubella
Ca_14130_v3 Cicer arietinum L.
Cc05_g15770 Coffea canephora
CDE05G2921 Ceratophyllum demersum
CDE11G0421 Ceratophyllum demersum
Cfa016965 Carpinus fangiana
Cfa016966 Carpinus fangiana
Ciclev10007600m.g Citrus clementina
CiPaw.12G143100 Carya illinoinensis
ClCG09G021770 Citrullus lanatus
COL.COLO4_30921 Corchorus olitorius
Cpa.g.sc12.60 Carica papaya
CsaV3_7G021290 Cucumis sativus L.
CSS0015837 Camellia sinensis var. sinensis
CSS0022030 Camellia sinensis var. sinensis
CSS0025023 Camellia sinensis var. sinensis
DCAR_016806 Daucus carota
Dinv19639 Davidia involucrata
Dinv40921 Davidia involucrata
Duzib170G1037 Durio zibethinus
Duzib268G0032 Durio zibethinus
ECA236G2587 Erigeron canadensis
EL10Ac4g07635 Beta vulgaris
Eucgr.F01983 Eucalyptus grandis
FAN11G0133 Fragaria x ananassa
FAN16G2562 Fragaria x ananassa
FAN21G3314 Fragaria x ananassa
FAN25G3031 Fragaria x ananassa
FvH4_3g41520 Fragaria vesca
Glyma.04G114300 Glycine max
Glyma.06G321000 Glycine max
Gohir.A13G128200 Gossypium hirsutum
Gohir.D13G131600 Gossypium hirsutum
Gorai.013G147600 Gossypium raimondii
GSVIVG01014850001 Vitis vinifera
HanXRQChr17g0546881 Helianthus annuus
Haze_09920 Corylus avellana
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla
HPP92_019365 Vanilla planifolia
HPP92_028055 Vanilla planifolia
HPP92_028056 Vanilla planifolia
Hund01927 Selenicereus undatus
Hund01929 Selenicereus undatus
Lalb_Chr15g0079911 Lupinus albus
Lalb_Chr18g0048701 Lupinus albus
Lj1A901G38 Lonicera japonica
Lj1A901T36 Lonicera japonica
Lj3g0022247 Lotus japonicus
Lsat_1_v5_gn_7_115861 Lactuca sativa
Manes.01G007300 Manihot esculenta
Manes.01G007400 Manihot esculenta
MBI14_g10255_MAGBIO Magnolia biondii
MD03G1043600 Malus domestica
MD11G1047100 Malus domestica
Medtr3g009540 Medicago truncatula
MELO3C013227.2 Cucumis melo
Migut.H01706 Erythranthe guttata
Migut.M01578 Erythranthe guttata
MSTRG.13052 Avicennia marina
MSTRG.16129 Avicennia marina
MSTRG.7045 Avicennia marina
Nitab4.5_0000611g0180 Nicotiana tabacum
Nitab4.5_0001622g0140 Nicotiana tabacum
Nn1g09430 Nelumbo nucifera
Nn7g37452 Nelumbo nucifera
Oeu015275.1 Olea europaea
Oeu052022.1 Olea europaea
Oeu062669.1 Olea europaea
Peaxi162Scf00006g00092 Petunia axillaris
PGSC0003DMG400002313 Solanum tuberosum
PGSC0003DMG400011270 Solanum tuberosum
Phvul.005G005100 Phaseolus vulgaris
Potri.001G472600 Populus trichocarpa
Potri.011G169200 Populus trichocarpa
Prupe.6G035900 Prunus persica
Psat5g231360 Pisum sativum
Psat6g196680 Pisum sativum
PSO063G4895 Papaver somniferum
PSO782G2174 Papaver somniferum
QL08p000429 Quercus lobata
RcHm_v2.0_Chr5g0074471 Rosa chinensis
Rhsim06G0235600 Rhododendron simsii
Sabra11G0137600 Salix brachista
Sabra16G0320800 Salix brachista
SalBow8G4453 Salvia bowleyana
Sc03g0011800 Simmondsia chinensis
Sed0014853 Sechium edule
Sed0021044 Sechium edule
SEGI_32826 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40232 Striga asiatica
Solyc10g005700.3 Solanum lycopersicum
Solyc12g017230.2 Solanum lycopersicum
Sopen10g001670 Solanum pennellii
Sopen12g008050 Solanum pennellii
Sp7g24360 Schrenkiella parvula
TAR627G1206 Trochodendron aralioides
TAR629G3046 Trochodendron aralioides
THA.LOC104813465 Tarenaya hassleriana
THA.LOC104813471 Tarenaya hassleriana
Thecc.07G000900 Theobroma cacao
Thhalv10024531m.g Eutrema salsugineum
TPR.G16700 Trifolium pratense
TWI39G0285 Tripterygium wilfordii
unitig_37.g12212 Utricularia gibba
unitig_46.g18526 Utricularia gibba
vmacro11645 Vaccinium macrocarpon
VMungo1080G0452 Vigna mungo

User provided reference genes

Program Settings