Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04280 Brassica napus
Aa31LG3G17290 Aethionema arabicum
Actinidia06667 Actinidia chinensis
Ah.03g146600 Amaranthus hybridus
AL6G20230 Arabidopsis lyrata
Aqoxy3G02633 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2XR3X5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3896ZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4DFA8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4L9II4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4UVV3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67XQRG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6JE7GZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9IQI21 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2IFSH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1HTRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1FWBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I27Z20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ILAW0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC5TG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MMTF8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SHST7E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQF3WB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y74X5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJV2YZ Arachis hypogaea
AT5G09820 Arabidopsis thaliana
Atru.chr4.1044 Acer truncatum
Atru.chr4.1055 Acer truncatum
Atru.chr4.540 Acer truncatum
BcaNung05557 Brassica carinata
BolC3t13007H Brassica oleracea
BraA03t09772Z Brassica rapa
C03p04720 Brassica napus
CAN.G249.7 Capsicum annuum
CANSAT01G3211 Cannabis sativa
CARHR203580 Cardamine hirsuta
Carub.0006s0824 Capsella rubella
Ca_17664_v3 Cicer arietinum L.
Cc07_g17370 Coffea canephora
CDE04G2754 Ceratophyllum demersum
CDE12G0169 Ceratophyllum demersum
Ciclev10026263m.g Citrus clementina
CiPaw.03G123800 Carya illinoinensis
COL.COLO4_22418 Corchorus olitorius
COL.COLO4_22420 Corchorus olitorius
Cpa.g.c33395.2 Carica papaya
Cre03.g188700 Chlamydomonas reinhardtii
Cre16.g649200 Chlamydomonas reinhardtii
CSS0003387 Camellia sinensis var. sinensis
CSS0035922 Camellia sinensis var. sinensis
DCAR_027256 Daucus carota
Dinv09933 Davidia involucrata
Dinv15112 Davidia involucrata
Duzib147G1259 Durio zibethinus
Duzib264G0763 Durio zibethinus
ECA238G2757 Erigeron canadensis
EL10Ac6g15254 Beta vulgaris
Eucgr.I00244 Eucalyptus grandis
FAN19G1272 Fragaria x ananassa
FAN19G2811 Fragaria x ananassa
FAN23G0034 Fragaria x ananassa
FAN26G2344 Fragaria x ananassa
FAN28G2344 Fragaria x ananassa
FvH4_1g23570 Fragaria vesca
FvH4_1g28530 Fragaria vesca
Glyma.05G188200 Glycine max
Glyma.08G146300 Glycine max
Gohir.A06G149400 Gossypium hirsutum
Gohir.D06G155500 Gossypium hirsutum
Gorai.002G151300 Gossypium raimondii
Gorai.010G181700 Gossypium raimondii
GSVIVG01026586001 Vitis vinifera
HanXRQChr15g0490251 Helianthus annuus
Haze_25187 Corylus avellana
Haze_25191 Corylus avellana
Haze_25195 Corylus avellana
Hma1.2p1_0006F.1_g004880 Hydrangea macrophylla
HPP92_016149 Vanilla planifolia
Hund03480 Selenicereus undatus
Lalb_Chr12g0203331 Lupinus albus
Lalb_Chr12g0203341 Lupinus albus
Lj4A856T34 Lonicera japonica
Lj4g0014342 Lotus japonicus
Lsat_1_v5_gn_4_138241 Lactuca sativa
Manes.13G086600 Manihot esculenta
Mapoly0058s0022 Marchantia polymorpha
Mapoly0060s0002 Marchantia polymorpha
MBI09_g18623_MAGBIO Magnolia biondii
MBI09_g20114_MAGBIO Magnolia biondii
MBI09_g47602_MAGBIO Magnolia biondii
MD01G1001300 Malus domestica
MD15G1343200 Malus domestica
Medtr8g092680 Medicago truncatula
Migut.H01114 Erythranthe guttata
Nitab4.5_0002064g0060 Nicotiana tabacum
Nitab4.5_0009320g0020 Nicotiana tabacum
Nn5g28726 Nelumbo nucifera
Oeu047646.1 Olea europaea
Os04g0422000 Oryza sativa ssp. japonica
Peaxi162Scf00025g02122 Petunia axillaris
PGR119G0285 Punica granatum
PGSC0003DMG400003986 Solanum tuberosum
Phvul.002G269000 Phaseolus vulgaris
Potri.001G309300 Populus trichocarpa
Pp3c3_12020 Physcomitrium patens
PRCOL_00002581 Prasinoderma coloniale
Prupe.6G163100 Prunus persica
Psat7g048760 Pisum sativum
PSO541G2505 Papaver somniferum
PSO675G3544 Papaver somniferum
QL06p051868 Quercus lobata
RcHm_v2.0_Chr2g0119061 Rosa chinensis
RcHm_v2.0_Chr2g0119121 Rosa chinensis
Rhsim08G0003400 Rhododendron simsii
Sabra16G0195100 Salix brachista
SalBow2G3104 Salvia bowleyana
Sc03g0004740 Simmondsia chinensis
SEGI_39378 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35114 Striga asiatica
SMO347G0319 Selaginella moellendorffii
SMO358G0575 Selaginella moellendorffii
Solyc11g005340.3 Solanum lycopersicum
Sopen11g001350 Solanum pennellii
Sp6g33590 Schrenkiella parvula
TAR381G0497 Trochodendron aralioides
TAR625G0848 Trochodendron aralioides
THA.LOC104818465 Tarenaya hassleriana
Thecc.01G121000 Theobroma cacao
Thecc.01G121200 Theobroma cacao
Thhalv10014407m.g Eutrema salsugineum
TPR.G2176 Trifolium pratense
TWI75G0275 Tripterygium wilfordii
unitig_899.g14706 Utricularia gibba
vmacro18658 Vaccinium macrocarpon
VMungo0251G2076 Vigna mungo
Zm00001eb083210 Zea mays

User provided reference genes

Program Settings