Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32920 Brassica napus
Aa31LG2G7610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis
Actinidia00142 Actinidia chinensis
Actinidia11729 Actinidia chinensis
Ah.02g128470 Amaranthus hybridus
AL5G11770 Arabidopsis lyrata
Aqoxy1G02010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea
AT2G02500 Arabidopsis thaliana
ATR1089G013 Amborella trichopoda
Atru.chr6.139 Acer truncatum
AUR62030219 Chenopodium quinoa
AUR62032486 Chenopodium quinoa
AUR62042241 Chenopodium quinoa
BcaB07g30331 Brassica carinata
BcaC03g17145 Brassica carinata
BolC2t11148H Brassica oleracea
BraA02t08315Z Brassica rapa
C02p50650 Brassica napus
CAN.G1379.8 Capsicum annuum
CAN.G242.16 Capsicum annuum
CANSAT01G0358 Cannabis sativa
CARHR145060 Cardamine hirsuta
Carub.0005s0153 Capsella rubella
Ca_13523_v3 Cicer arietinum L.
Ca_21047_v3 Cicer arietinum L.
Ca_29126_v3 Cicer arietinum L.
CBR_g214 Chara braunii
Cc02_g23630 Coffea canephora
CDE02G0980 Ceratophyllum demersum
CDE04G2298 Ceratophyllum demersum
Cfa004424 Carpinus fangiana
Ciclev10002035m.g Citrus clementina
CiPaw.06G177000 Carya illinoinensis
ClCG10G007530 Citrullus lanatus
COL.COLO4_31208 Corchorus olitorius
Cpa.g.sc173.2 Carica papaya
Cre16.g679669 Chlamydomonas reinhardtii
CsaV3_3G006740 Cucumis sativus L.
CSS0021874 Camellia sinensis var. sinensis
DCAR_001732 Daucus carota
DCAR_031998 Daucus carota
Dinv29650 Davidia involucrata
Dinv38445 Davidia involucrata
ECA246G0516 Erigeron canadensis
EL10Ac6g13962 Beta vulgaris
Eucgr.I02806 Eucalyptus grandis
FAN04G0313 Fragaria x ananassa
FAN04G2212 Fragaria x ananassa
FAN08G0833 Fragaria x ananassa
FAN08G1519 Fragaria x ananassa
FAN08G1685 Fragaria x ananassa
FAN08G2810 Fragaria x ananassa
FAN08G3692 Fragaria x ananassa
FAN13G1518 Fragaria x ananassa
FAN13G2879 Fragaria x ananassa
FAN18G0293 Fragaria x ananassa
FvH4_5g27480 Fragaria vesca
FvH4_5g27491 Fragaria vesca
FvH4_5g27493 Fragaria vesca
Glyma.17G002400 Glycine max
Gohir.A06G112500 Gossypium hirsutum
Gohir.D06G117100 Gossypium hirsutum
Gorai.010G134700 Gossypium raimondii
GSVIVG01023131001 Vitis vinifera
HanXRQChr03g0069601 Helianthus annuus
HanXRQChr05g0153021 Helianthus annuus
HanXRQChr09g0249911 Helianthus annuus
HanXRQChr14g0444001 Helianthus annuus
Haze_09964 Corylus avellana
HPP92_003715 Vanilla planifolia
HPP92_003721 Vanilla planifolia
Hund15335 Selenicereus undatus
Lalb_Chr07g0176831 Lupinus albus
Lj4g0018255 Lotus japonicus
Lj5A292T53 Lonicera japonica
Lj5A292T54 Lonicera japonica
Lj5A292T55 Lonicera japonica
Lsat_1_v5_gn_9_124861 Lactuca sativa
Manes.14G146200 Manihot esculenta
Manes.14G166900 Manihot esculenta
Mapoly0006s0146 Marchantia polymorpha
MBI06_g17067_MAGBIO Magnolia biondii
MCO15G500 Micromonas commoda
MD08G1249400 Malus domestica
MD15G1444200 Malus domestica
Medtr4g129075 Medicago truncatula
Medtr4g134540 Medicago truncatula
MELO3C016431.2 Cucumis melo
Migut.B00706 Erythranthe guttata
MSTRG.16459 Avicennia marina
MSTRG.20341 Avicennia marina
Nitab4.5_0001085g0130 Nicotiana tabacum
Nitab4.5_0006159g0030 Nicotiana tabacum
Nn5g27134 Nelumbo nucifera
Oeu000159.1 Olea europaea
Os01g0887100 Oryza sativa ssp. japonica
Peaxi162Scf00194g01045 Petunia axillaris
PGR142G1782 Punica granatum
PGSC0003DMG401018218 Solanum tuberosum
Phvul.003G090900 Phaseolus vulgaris
Potri.004G230200 Populus trichocarpa
Pp3c15_1010 Physcomitrium patens
Pp3c9_590 Physcomitrium patens
Prupe.1G586600 Prunus persica
Psat0s2555g0200 Pisum sativum
PSO210G4998 Papaver somniferum
QL02p103676 Quercus lobata
RcHm_v2.0_Chr7g0218881 Rosa chinensis
Rhsim11G0115300 Rhododendron simsii
Sabra01G0175500 Salix brachista
Sc09g0007750 Simmondsia chinensis
Sed0000786 Sechium edule
SEGI_39309 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34439 Striga asiatica
SMO367G1054 Selaginella moellendorffii
SMO367G1090 Selaginella moellendorffii
Solyc01g102820.4 Solanum lycopersicum
Sopen01g045220 Solanum pennellii
Sp2g13750 Schrenkiella parvula
TAR628G0241 Trochodendron aralioides
THA.LOC104801778 Tarenaya hassleriana
Thecc.06G064100 Theobroma cacao
Thhalv10004647m.g Eutrema salsugineum
TPR.G5996 Trifolium pratense
TWI23G0175 Tripterygium wilfordii
unitig_21.g20570 Utricularia gibba
vmacro01624 Vaccinium macrocarpon
VMungo1215G1111 Vigna mungo
VMungo1364G0001 Vigna mungo
Zm00001eb145390 Zea mays
Zm00001eb365960 Zea mays

User provided reference genes

Program Settings