Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05400 Brassica napus
A08p35240 Brassica napus
A09p65930 Brassica napus
Aa31sc785G10 Aethionema arabicum
Actinidia35474 Actinidia chinensis
Actinidia37070 Actinidia chinensis
Ah.08g223250 Amaranthus hybridus
AL1G18790 Arabidopsis lyrata
Aqoxy4G02709 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea
AT1G08380 Arabidopsis thaliana
ATR0579G079 Amborella trichopoda
ATR0772G031 Amborella trichopoda
Atru.chr3.3161 Acer truncatum
AUR62001528 Chenopodium quinoa
BcaB03g13338 Brassica carinata
BcaB03g13340 Brassica carinata
BcaB07g34086 Brassica carinata
BcaC07g41946 Brassica carinata
BcaC07g42532 Brassica carinata
BolC5t29412H Brassica oleracea
BolC8t52533H Brassica oleracea
BraA06t23749Z Brassica rapa
BraA08t35432Z Brassica rapa
BraA09t41937Z Brassica rapa
C05p06520 Brassica napus
C08p03620 Brassica napus
C08p50030 Brassica napus
CAN.G919.41 Capsicum annuum
CANSAT54G0546 Cannabis sativa
CARHR008270 Cardamine hirsuta
Carub.0001s0773 Capsella rubella
Ca_26075_v3 Cicer arietinum L.
Cc01_g08780 Coffea canephora
CDE02G1582 Ceratophyllum demersum
CDE08G1285 Ceratophyllum demersum
Cfa009983 Carpinus fangiana
Ciclev10029515m.g Citrus clementina
CiPaw.14G097600 Carya illinoinensis
ClCG01G011760 Citrullus lanatus
Cpa.g.sc195.32 Carica papaya
Cre07.g334550 Chlamydomonas reinhardtii
CsaV3_1G015100 Cucumis sativus L.
CSS0022105 Camellia sinensis var. sinensis
CSS0045008 Camellia sinensis var. sinensis
DCAR_012226 Daucus carota
Dinv22811 Davidia involucrata
Duzib170G0332 Durio zibethinus
ECA236G2734 Erigeron canadensis
EL10Ac4g08170 Beta vulgaris
EL10Ac4g08175 Beta vulgaris
Eucgr.B03824 Eucalyptus grandis
FAN11G1786 Fragaria x ananassa
FAN16G1033 Fragaria x ananassa
FAN21G2850 Fragaria x ananassa
FAN25G1572 Fragaria x ananassa
FvH4_3g25770 Fragaria vesca
Glyma.11G181100 Glycine max
Glyma.12G092000 Glycine max
Gohir.A05G079200 Gossypium hirsutum
Gohir.A07G111250 Gossypium hirsutum
Gohir.D05G082100 Gossypium hirsutum
Gohir.D07G115000 Gossypium hirsutum
Gorai.001G123200 Gossypium raimondii
Gorai.009G083700 Gossypium raimondii
GSVIVG01036077001 Vitis vinifera
HanXRQChr04g0128561 Helianthus annuus
Haze_23342 Corylus avellana
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla
HPP92_009876 Vanilla planifolia
Hund18778 Selenicereus undatus
Lalb_Chr03g0028281 Lupinus albus
Lj3g0027363 Lotus japonicus
Lsat_1_v5_gn_7_85921 Lactuca sativa
Manes.04G000900 Manihot esculenta
Manes.11G164551 Manihot esculenta
Mapoly0064s0077 Marchantia polymorpha
MBI17_g28186_MAGBIO Magnolia biondii
MCO01G581 Micromonas commoda
MD03G1150500 Malus domestica
MD11G1169900 Malus domestica
MD11G1234000 Malus domestica
MD17G1209900 Malus domestica
Medtr4g052420 Medicago truncatula
MELO3C025587.2 Cucumis melo
Migut.D02409 Erythranthe guttata
MSTRG.18774 Avicennia marina
Nitab4.5_0000937g0110 Nicotiana tabacum
Nitab4.5_0003068g0060 Nicotiana tabacum
Nitab4.5_0005472g0080 Nicotiana tabacum
Nitab4.5_0006903g0010 Nicotiana tabacum
Nn2g14238 Nelumbo nucifera
Nn6g34798 Nelumbo nucifera
Oeu002356.1 Olea europaea
Oeu027147.1 Olea europaea
Os04g0414700 Oryza sativa ssp. japonica
Peaxi162Scf00091g00713 Petunia axillaris
Peaxi162Scf00345g01024 Petunia axillaris
PGR102G0055 Punica granatum
PGSC0003DMG400005890 Solanum tuberosum
Phvul.011G096400 Phaseolus vulgaris
Potri.004G199400 Populus trichocarpa
Potri.009G160800 Populus trichocarpa
Pp3c15_16690 Physcomitrium patens
Pp3c15_16700 Physcomitrium patens
Prupe.6G137400 Prunus persica
Psat7g186640 Pisum sativum
PSO339G3866 Papaver somniferum
PSO384G5049 Papaver somniferum
QL01p011787 Quercus lobata
RcHm_v2.0_Chr5g0046981 Rosa chinensis
Rhsim01G0203000 Rhododendron simsii
Sabra04G0134500 Salix brachista
Sabra09G0125800 Salix brachista
SalBow6G0820 Salvia bowleyana
Sc12g0004680 Simmondsia chinensis
Sed0025059 Sechium edule
SEGI_08129 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03995 Striga asiatica
SMO163G0051 Selaginella moellendorffii
Solyc06g074200.4 Solanum lycopersicum
Sopen06g030620 Solanum pennellii
Sp1g07030 Schrenkiella parvula
TAR623G1200 Trochodendron aralioides
TAR633G2174 Trochodendron aralioides
THA.LOC104826438 Tarenaya hassleriana
Thecc.09G277800 Theobroma cacao
Thhalv10009047m.g Eutrema salsugineum
TPR.G17220 Trifolium pratense
TWI75G1160 Tripterygium wilfordii
unitig_0.g1472 Utricularia gibba
unitig_88.g27645 Utricularia gibba
vmacro14338 Vaccinium macrocarpon
VMungo1127G0741 Vigna mungo
Zm00001eb083680 Zea mays

User provided reference genes

Program Settings