Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33310 Brassica napus
Actinidia08995 Actinidia chinensis
Ah.01g021740 Amaranthus hybridus
AL3G28880 Arabidopsis lyrata
Aqoxy7G01547 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWI3GZ Arachis hypogaea
AT3G16190 Arabidopsis thaliana
ATR0736G109 Amborella trichopoda
Atru.chr1.3413 Acer truncatum
Atru.chr1.3414 Acer truncatum
AUR62011683 Chenopodium quinoa
AUR62011684 Chenopodium quinoa
AUR62016508 Chenopodium quinoa
AUR62016509 Chenopodium quinoa
BcaC09g48588 Brassica carinata
BraA05t22156Z Brassica rapa
C05p50310 Brassica napus
CAN.G214.3 Capsicum annuum
CAN.G438.34 Capsicum annuum
CANSAT56G2118 Cannabis sativa
CANSAT56G4082 Cannabis sativa
CARHR091380 Cardamine hirsuta
Carub.0003s1594 Capsella rubella
Ca_20421_v3 Cicer arietinum L.
CBR_g48432 Chara braunii
Cc04_g02920 Coffea canephora
CDE08G1506 Ceratophyllum demersum
Cfa002103 Carpinus fangiana
Ciclev10026541m.g Citrus clementina
Ciclev10026617m.g Citrus clementina
CiPaw.01G234800 Carya illinoinensis
ClCG09G001890 Citrullus lanatus
COL.COLO4_18473 Corchorus olitorius
COL.COLO4_30455 Corchorus olitorius
COL.COLO4_30457 Corchorus olitorius
Cpa.g.sc1241.2 Carica papaya
Cre16.g674650 Chlamydomonas reinhardtii
CsaV3_7G033450 Cucumis sativus L.
CSS0031663 Camellia sinensis var. sinensis
DCAR_016205 Daucus carota
Dinv38010 Davidia involucrata
Duzib235G1329 Durio zibethinus
ECA234G0336 Erigeron canadensis
EL10Ac9g22053 Beta vulgaris
Eucgr.J02954 Eucalyptus grandis
FAN02G2498 Fragaria x ananassa
FAN05G4480 Fragaria x ananassa
FAN14G0081 Fragaria x ananassa
FvH4_6g31890 Fragaria vesca
Glyma.07G018600 Glycine max
Glyma.08G203700 Glycine max
Glyma.08G203800 Glycine max
Gohir.A02G119700 Gossypium hirsutum
Gohir.D03G062533 Gossypium hirsutum
Gohir.D03G066800 Gossypium hirsutum
Gorai.003G064300 Gossypium raimondii
GSVIVG01017053001 Vitis vinifera
GSVIVG01017054001 Vitis vinifera
HanXRQChr10g0313501 Helianthus annuus
Haze_16346 Corylus avellana
HPP92_003927 Vanilla planifolia
Lalb_Chr04g0262841 Lupinus albus
Lj5g0006747 Lotus japonicus
Lj5g0010105 Lotus japonicus
Lj9A509T93 Lonicera japonica
Manes.04G130900 Manihot esculenta
Manes.11G037100 Manihot esculenta
Mapoly0052s0007 Marchantia polymorpha
MBI04_g04855_MAGBIO Magnolia biondii
MD09G1208600 Malus domestica
Medtr4g011330 Medicago truncatula
MELO3C027085.2 Cucumis melo
MELO3C035027.2 Cucumis melo
Migut.D01013 Erythranthe guttata
Migut.D01014 Erythranthe guttata
MSTRG.9467 Avicennia marina
Nitab4.5_0001315g0030 Nicotiana tabacum
Nitab4.5_0001968g0140 Nicotiana tabacum
Nitab4.5_0003039g0010 Nicotiana tabacum
Nitab4.5_0004205g0010 Nicotiana tabacum
Nn3g18122 Nelumbo nucifera
Oeu029646.1 Olea europaea
Os02g0276200 Oryza sativa ssp. japonica
Os02g0276400 Oryza sativa ssp. japonica
Peaxi162Scf00015g00131 Petunia axillaris
Peaxi162Scf00015g00132 Petunia axillaris
PGR102G0856 Punica granatum
PGSC0003DMG400002629 Solanum tuberosum
Phvul.010G147700 Phaseolus vulgaris
Phvul.010G147800 Phaseolus vulgaris
Potri.003G051700 Populus trichocarpa
Pp3c13_4590 Physcomitrium patens
Prupe.3G064800 Prunus persica
Psat5g078240 Pisum sativum
Psat5g078360 Pisum sativum
Psat7g255000 Pisum sativum
Psat7g255080 Pisum sativum
PSO063G2380 Papaver somniferum
PSO210G2136 Papaver somniferum
PSO210G3060 Papaver somniferum
PSO421G0294 Papaver somniferum
QL02p037511 Quercus lobata
QL05p021437 Quercus lobata
RcHm_v2.0_Chr2g0139241 Rosa chinensis
RcHm_v2.0_Chr2g0139251 Rosa chinensis
Rhsim12G0201100 Rhododendron simsii
Sabra03G0027300 Salix brachista
SalBow7G0412 Salvia bowleyana
SalBow7G1899 Salvia bowleyana
Sc12g0009500 Simmondsia chinensis
Sed0000814 Sechium edule
Sed0018991 Sechium edule
Sed0023183 Sechium edule
SEGI_12338 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02011 Striga asiatica
SGA_v2.0_scaffold68G22977 Striga asiatica
SMO147G0229 Selaginella moellendorffii
Solyc03g120540.3 Solanum lycopersicum
Sopen03g039400 Solanum pennellii
Sopen12g022580 Solanum pennellii
Sp3g14560 Schrenkiella parvula
TAR383G0711 Trochodendron aralioides
THA.LOC104817977 Tarenaya hassleriana
Thecc.06G094500 Theobroma cacao
Thhalv10021560m.g Eutrema salsugineum
TPR.G1351 Trifolium pratense
TPR.G38603 Trifolium pratense
TPR.G40810 Trifolium pratense
unitig_746.g26661 Utricularia gibba
vmacro16973 Vaccinium macrocarpon
VMungo0331G0597 Vigna mungo
VMungo0331G1814 Vigna mungo
Zm00001eb237290 Zea mays

User provided reference genes

Program Settings