Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21760 Brassica napus
A07p27870 Brassica napus
Aa31LG4G7830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis
Actinidia02604 Actinidia chinensis
Actinidia03505 Actinidia chinensis
Actinidia13808 Actinidia chinensis
Actinidia34351 Actinidia chinensis
Ah.05g172270 Amaranthus hybridus
AL2G37930 Arabidopsis lyrata
Aqoxy6G01736 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea
AT1G77710 Arabidopsis thaliana
ATR0041G005 Amborella trichopoda
Atru.chr13.1343 Acer truncatum
AUR62004713 Chenopodium quinoa
BcaB02g07127 Brassica carinata
BcaB05g25069 Brassica carinata
BcaC03g15763 Brassica carinata
BcaC08g45458 Brassica carinata
BolC2t09520H Brassica oleracea
BolC6t38248H Brassica oleracea
BraA02t07181Z Brassica rapa
BraA07t30426Z Brassica rapa
C06p30860 Brassica napus
CAN.G1483.5 Capsicum annuum
CAN.G947.38 Capsicum annuum
CANSAT54G2625 Cannabis sativa
CARHR071220 Cardamine hirsuta
Carub.0002s2459 Capsella rubella
Ca_19025_v3 Cicer arietinum L.
Ca_26775_v3 Cicer arietinum L.
CBR_g44443 Chara braunii
Cc06_g19090 Coffea canephora
CDE06G1598 Ceratophyllum demersum
CDE08G1473 Ceratophyllum demersum
Ciclev10002945m.g Citrus clementina
CiPaw.05G226800 Carya illinoinensis
ClCG03G009400 Citrullus lanatus
COL.COLO4_38344 Corchorus olitorius
Cpa.g.sc36.14 Carica papaya
CsaV3_5G023210 Cucumis sativus L.
CSS0012578 Camellia sinensis var. sinensis
Dinv20715 Davidia involucrata
Dinv27358 Davidia involucrata
Duzib041G0199 Durio zibethinus
Duzib093G1773 Durio zibethinus
ECA238G1260 Erigeron canadensis
EL10Ac1g00017 Beta vulgaris
Eucgr.F03755 Eucalyptus grandis
FAN20G1151 Fragaria x ananassa
FAN27G1241 Fragaria x ananassa
FvH4_2g26390 Fragaria vesca
Glyma.04G252400 Glycine max
Glyma.06G110100 Glycine max
Glyma.13G082800 Glycine max
Glyma.14G163800 Glycine max
Gohir.A02G074200 Gossypium hirsutum
Gohir.A06G041900 Gossypium hirsutum
Gohir.D02G081400 Gossypium hirsutum
Gohir.D06G042900 Gossypium hirsutum
Gorai.005G091100 Gossypium raimondii
Gorai.010G048100 Gossypium raimondii
GSVIVG01008919001 Vitis vinifera
HanXRQChr14g0432351 Helianthus annuus
Haze_27250 Corylus avellana
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla
HPP92_019366 Vanilla planifolia
HPP92_028057 Vanilla planifolia
Hund16832 Selenicereus undatus
Hund27043 Selenicereus undatus
Lalb_Chr08g0241571 Lupinus albus
Lalb_Chr23g0270881 Lupinus albus
Lj1g0016776 Lotus japonicus
Lsat_1_v5_gn_5_65281 Lactuca sativa
Manes.18G074500 Manihot esculenta
Mapoly0081s0039 Marchantia polymorpha
MBI09_g06382_MAGBIO Magnolia biondii
MD08G1169400 Malus domestica
MD15G1356000 Malus domestica
Medtr5g059210 Medicago truncatula
MELO3C003038.2 Cucumis melo
Migut.C01167 Erythranthe guttata
Migut.N03303 Erythranthe guttata
MSTRG.1473 Avicennia marina
MSTRG.22423 Avicennia marina
Nitab4.5_0000030g0080 Nicotiana tabacum
Nitab4.5_0000943g0120 Nicotiana tabacum
Nitab4.5_0013867g0020 Nicotiana tabacum
Nitab4.5_0014082g0020 Nicotiana tabacum
Nn5g28127 Nelumbo nucifera
Oeu026729.1 Olea europaea
Oeu050252.1 Olea europaea
Oeu050889.1 Olea europaea
Oeu062544.1 Olea europaea
Os01g0962400 Oryza sativa ssp. japonica
Peaxi162Scf00408g00839 Petunia axillaris
Peaxi162Scf00876g00433 Petunia axillaris
PGR042G1865 Punica granatum
PGSC0003DMG400029291 Solanum tuberosum
PGSC0003DMG400030853 Solanum tuberosum
Phvul.009G121900 Phaseolus vulgaris
Potri.002G087200 Populus trichocarpa
Potri.005G173800 Populus trichocarpa
Pp3c6_16720 Physcomitrium patens
PRCOL_00001930 Prasinoderma coloniale
Prupe.1G503300 Prunus persica
Psat2g096080 Pisum sativum
PSO170G5049 Papaver somniferum
PSO528G0083 Papaver somniferum
QL09p036189 Quercus lobata
RcHm_v2.0_Chr6g0294951 Rosa chinensis
Rhsim11G0066600 Rhododendron simsii
Sabra02G0068700 Salix brachista
SalBow7G1395 Salvia bowleyana
SalBow7G3105 Salvia bowleyana
Sc23g0000830 Simmondsia chinensis
Sed0000902 Sechium edule
Sed0022236 Sechium edule
SGA_v2.0_scaffold24G10489 Striga asiatica
SMO147G0269 Selaginella moellendorffii
Solyc08g075780.4 Solanum lycopersicum
Solyc12g096120.2 Solanum lycopersicum
Sopen12g032000 Solanum pennellii
Sp5g32880 Schrenkiella parvula
TAR376G0464 Trochodendron aralioides
THA.LOC104813142 Tarenaya hassleriana
THA.LOC104817112 Tarenaya hassleriana
Thecc.08G119900 Theobroma cacao
Thhalv10019370m.g Eutrema salsugineum
TPR.G8501 Trifolium pratense
TWI12G1472 Tripterygium wilfordii
TWI56G0667 Tripterygium wilfordii
unitig_37.g12684 Utricularia gibba
Zm00001eb140360 Zea mays

User provided reference genes

Program Settings