Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29160 Brassica napus
Aa31LG9G3210 Aethionema arabicum
Actinidia13837 Actinidia chinensis
Actinidia29190 Actinidia chinensis
Ah.04g149630 Amaranthus hybridus
Ah.04g149640 Amaranthus hybridus
AL7G42200 Arabidopsis lyrata
Aqoxy2G04074 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea
AT4G14180 Arabidopsis thaliana
ATR0582G376 Amborella trichopoda
Atru.chr3.1765 Acer truncatum
Atru.chr3.1766 Acer truncatum
AUR62018536 Chenopodium quinoa
AUR62020881 Chenopodium quinoa
BcaB01g02715 Brassica carinata
BcaB01g02718 Brassica carinata
BcaC01g04643 Brassica carinata
BolC3t15845H Brassica oleracea
BraA03t12111Z Brassica rapa
C03p35350 Brassica napus
CAN.G781.41 Capsicum annuum
CANSAT78G1330 Cannabis sativa
CARHR220210 Cardamine hirsuta
CARHR220220 Cardamine hirsuta
Carub.0007s2821 Capsella rubella
Ca_16431_v3 Cicer arietinum L.
CBR_g39378 Chara braunii
Cc03_g09140 Coffea canephora
CDE02G2388 Ceratophyllum demersum
Cfa008665 Carpinus fangiana
Ciclev10004169m.g Citrus clementina
CiPaw.01G113500 Carya illinoinensis
ClCG08G003660 Citrullus lanatus
COL.COLO4_35960 Corchorus olitorius
Cpa.g.sc157.13 Carica papaya
CsaV3_6G003070 Cucumis sativus L.
CSS0048714 Camellia sinensis var. sinensis
DCAR_026668 Daucus carota
Dinv32168 Davidia involucrata
Dinv32169 Davidia involucrata
Duzib212G0903 Durio zibethinus
ECA238G0348 Erigeron canadensis
EL10Ac3g07437 Beta vulgaris
Eucgr.F02519 Eucalyptus grandis
Eucgr.H02630 Eucalyptus grandis
FAN07G2778 Fragaria x ananassa
FAN12G2514 Fragaria x ananassa
FAN17G0433 Fragaria x ananassa
FAN22G0619 Fragaria x ananassa
FvH4_4g12860 Fragaria vesca
Glyma.11G253600 Glycine max
Gohir.A02G016900 Gossypium hirsutum
Gohir.D02G018500 Gossypium hirsutum
Gorai.005G022800 Gossypium raimondii
GSVIVG01031569001 Vitis vinifera
HanXRQChr14g0436391 Helianthus annuus
Haze_11684 Corylus avellana
HPP92_024556 Vanilla planifolia
HPP92_024560 Vanilla planifolia
HPP92_024561 Vanilla planifolia
Lalb_Chr24g0394531 Lupinus albus
Lalb_Chr24g0394541 Lupinus albus
Lj3A268T25 Lonicera japonica
Lj3C268T6 Lonicera japonica
Lj3C272T4 Lonicera japonica
Lj5P691T0 Lonicera japonica
Lj6g0020014 Lotus japonicus
Lsat_1_v5_gn_2_47921 Lactuca sativa
Manes.05G198800 Manihot esculenta
Mapoly0195s0003 Marchantia polymorpha
MBI11_g07399_MAGBIO Magnolia biondii
MD04G1022200 Malus domestica
Medtr3g084640 Medicago truncatula
MELO3C026127.2 Cucumis melo
MELO3C030208.2 Cucumis melo
Migut.G00953 Erythranthe guttata
Nitab4.5_0001422g0060 Nicotiana tabacum
Nitab4.5_0009569g0040 Nicotiana tabacum
Nitab4.5_0009569g0060 Nicotiana tabacum
Nn5g30278 Nelumbo nucifera
Nn6g35069 Nelumbo nucifera
Nn8g41263 Nelumbo nucifera
Oeu050724.1 Olea europaea
Os04g0347800 Oryza sativa ssp. japonica
Peaxi162Scf00017g02338 Petunia axillaris
PGR083G1656 Punica granatum
PGSC0003DMG400024589 Solanum tuberosum
Phvul.001G265000 Phaseolus vulgaris
Phvul.004G062100 Phaseolus vulgaris
Phvul.006G051700 Phaseolus vulgaris
Potri.002G232700 Populus trichocarpa
Pp3c15_15330 Physcomitrium patens
Pp3c1_19010 Physcomitrium patens
Pp3c5_2370 Physcomitrium patens
Prupe.1G172400 Prunus persica
Prupe.1G176200 Prunus persica
Psat0s1368g0040 Pisum sativum
Psat2g094280 Pisum sativum
Psat2g094320 Pisum sativum
PSO017G3585 Papaver somniferum
PSO063G2404 Papaver somniferum
QL06p027298 Quercus lobata
RcHm_v2.0_Chr4g0412451 Rosa chinensis
RcHm_v2.0_Chr4g0412511 Rosa chinensis
Rhsim02G0090700 Rhododendron simsii
Sabra02G0177500 Salix brachista
SalBow1G5228 Salvia bowleyana
SalBow1G5941 Salvia bowleyana
Sc25g0005740 Simmondsia chinensis
Sed0004152 Sechium edule
SEGI_00340 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06118 Striga asiatica
SHI01039 Sapria himalayana
SHI01042 Sapria himalayana
SHI01044 Sapria himalayana
Solyc03g114040.3 Solanum lycopersicum
Sopen03g033090 Solanum pennellii
Sp5g13520 Schrenkiella parvula
TAR362G0451 Trochodendron aralioides
TAR633G2085 Trochodendron aralioides
THA.LOC104808673 Tarenaya hassleriana
Thecc.04G191000 Theobroma cacao
Thhalv10027320m.g Eutrema salsugineum
TPR.G18109 Trifolium pratense
TPR.G28787 Trifolium pratense
TWI56G0074 Tripterygium wilfordii
TWI56G0421 Tripterygium wilfordii
unitig_748.g8007 Utricularia gibba
unitig_748.g8008 Utricularia gibba
vmacro15590 Vaccinium macrocarpon
vmacro15591 Vaccinium macrocarpon
VMungo1383G2894 Vigna mungo
Zm00001eb389920 Zea mays

User provided reference genes

Program Settings