Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15810 Brassica napus
A10p09850 Brassica napus
A10p28990 Brassica napus
Aa31LG2G14300 Aethionema arabicum
Aa31LG2G14310 Aethionema arabicum
Aa31LG2G14360 Aethionema arabicum
Aa31LG3G8540 Aethionema arabicum
Actinidia03109 Actinidia chinensis
Actinidia34088 Actinidia chinensis
Ah.07g209060 Amaranthus hybridus
AL6G17460 Arabidopsis lyrata
AL8G26550 Arabidopsis lyrata
AL8G38860 Arabidopsis lyrata
Aqoxy7G00428 Aquilegia oxysepala
AT5G07230 Arabidopsis thaliana
AT5G52160 Arabidopsis thaliana
AT5G62080 Arabidopsis thaliana
ATR0757G068 Amborella trichopoda
Atru.chr1.509 Acer truncatum
AUR62016019 Chenopodium quinoa
AUR62021224 Chenopodium quinoa
BcaB01g04189 Brassica carinata
BcaB08g35564 Brassica carinata
BcaC01g06166 Brassica carinata
BcaC01g06170 Brassica carinata
BcaC06g32460 Brassica carinata
BolC3t14245H Brassica oleracea
BolC9t57041H Brassica oleracea
BolC9t59679H Brassica oleracea
BraA03t10871Z Brassica rapa
BraA10t43066Z Brassica rapa
BraA10t44947Z Brassica rapa
C03p18480 Brassica napus
C09p41580 Brassica napus
C09p69350 Brassica napus
CAN.G166.5 Capsicum annuum
CAN.G28.8 Capsicum annuum
CAN.G769.4 Capsicum annuum
CANSAT21G0877 Cannabis sativa
CARHR205910 Cardamine hirsuta
CARHR265080 Cardamine hirsuta
CARHR275870 Cardamine hirsuta
Carub.0006s0617 Capsella rubella
Carub.0008s1225 Capsella rubella
Carub.0008s2276 Capsella rubella
Ca_10790_v3 Cicer arietinum L.
Cc02_g03310 Coffea canephora
CDE11G0782 Ceratophyllum demersum
Ciclev10006307m.g Citrus clementina
CiPaw.03G103300 Carya illinoinensis
CiPaw.04G066700 Carya illinoinensis
COL.COLO4_14273 Corchorus olitorius
Cpa.g.sc107.18 Carica papaya
CsaV3_3G016880 Cucumis sativus L.
CSS0017664 Camellia sinensis var. sinensis
DCAR_014595 Daucus carota
DCAR_018177 Daucus carota
DCAR_018179 Daucus carota
Dinv35188 Davidia involucrata
Duzib068G0970 Durio zibethinus
Duzib084G1193 Durio zibethinus
EL10Ac3g05710 Beta vulgaris
Eucgr.K00231 Eucalyptus grandis
FAN03G0279 Fragaria x ananassa
FAN03G1726 Fragaria x ananassa
FvH4_7g29091 Fragaria vesca
Glyma.09G144000 Glycine max
Glyma.16G197100 Glycine max
Gohir.A11G009800 Gossypium hirsutum
Gohir.A12G260100 Gossypium hirsutum
Gohir.D09G040900 Gossypium hirsutum
Gohir.D11G009100 Gossypium hirsutum
Gohir.D12G260900 Gossypium hirsutum
Gorai.007G010700 Gossypium raimondii
Gorai.008G279600 Gossypium raimondii
HanXRQChr14g0462161 Helianthus annuus
Haze_13744 Corylus avellana
Hma1.2p1_1323F.1_g275520 Hydrangea macrophylla
HPP92_025369 Vanilla planifolia
HPP92_025495 Vanilla planifolia
Lalb_Chr01g0009161 Lupinus albus
Lalb_Chr19g0130991 Lupinus albus
Lj2g0004156 Lotus japonicus
Lsat_1_v5_gn_2_132960 Lactuca sativa
Manes.14G028300 Manihot esculenta
MD01G1197500 Malus domestica
Medtr1g101360 Medicago truncatula
MELO3C006883.2 Cucumis melo
Migut.F00365 Erythranthe guttata
Migut.F01138 Erythranthe guttata
Nitab4.5_0002107g0070 Nicotiana tabacum
Nitab4.5_0004480g0060 Nicotiana tabacum
Nn1g01375 Nelumbo nucifera
Nn8g41026 Nelumbo nucifera
Oeu062770.1 Olea europaea
Os08g0546300 Oryza sativa ssp. japonica
Os09g0525500 Oryza sativa ssp. japonica
Peaxi162Scf00040g00425 Petunia axillaris
Peaxi162Scf00132g01516 Petunia axillaris
PGR042G0682 Punica granatum
Phvul.004G120100 Phaseolus vulgaris
Potri.012G137400 Populus trichocarpa
Potri.015G139100 Populus trichocarpa
Prupe.2G290900 Prunus persica
Psat0s6119g0040 Pisum sativum
PSO478G4859 Papaver somniferum
PSO782G2995 Papaver somniferum
PSO782G3448 Papaver somniferum
PSO782G4359 Papaver somniferum
QL09p014765 Quercus lobata
RcHm_v2.0_Chr1g0376811 Rosa chinensis
Sabra15G0150200 Salix brachista
SalBow2G3129 Salvia bowleyana
Sc13g0008480 Simmondsia chinensis
Sc16g0005060 Simmondsia chinensis
Sed0000609 Sechium edule
Sed0025700 Sechium edule
SEGI_28459 Sequoiadendron giganteum
SEGI_28530 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05368 Striga asiatica
Solyc01g009590.3 Solanum lycopersicum
Solyc03g026115.1 Solanum lycopersicum
Solyc06g035820.1 Solanum lycopersicum
Sopen01g005120 Solanum pennellii
Sp2g25250 Schrenkiella parvula
Sp6g14410 Schrenkiella parvula
Sp6g35660 Schrenkiella parvula
TAR629G2474 Trochodendron aralioides
THA.LOC109117151 Tarenaya hassleriana
Thecc.03G171600 Theobroma cacao
Thhalv10005193m.g Eutrema salsugineum
Thhalv10015124m.g Eutrema salsugineum
Thhalv10015126m.g Eutrema salsugineum
TPR.G17428 Trifolium pratense
TWI63G0636 Tripterygium wilfordii
Zm00001eb198610 Zea mays
Zm00001eb319020 Zea mays

User provided reference genes

Program Settings