Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21590 Brassica napus
Aa31LG5G20900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis
Actinidia19445 Actinidia chinensis
Actinidia19446 Actinidia chinensis
Ah.10g030810 Amaranthus hybridus
AL4G20290 Arabidopsis lyrata
AL4G20430 Arabidopsis lyrata
AL4G36080 Arabidopsis lyrata
AL6G43530 Arabidopsis lyrata
Aqoxy1G00222 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B52RT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea
AT2G38780 Arabidopsis thaliana
ATR0217G018 Amborella trichopoda
Atru.chr11.2464 Acer truncatum
Atru.chr11.2492 Acer truncatum
AUR62031673 Chenopodium quinoa
AUR62032557 Chenopodium quinoa
BolC3t14946H Brassica oleracea
BraA03t11395Z Brassica rapa
C03p25580 Brassica napus
CAN.G1571.4 Capsicum annuum
CANSAT54G2531 Cannabis sativa
CARHR125840 Cardamine hirsuta
CARHR133490 Cardamine hirsuta
Carub.0004s2080 Capsella rubella
Ca_20909_v3 Cicer arietinum L.
CBR_g29393 Chara braunii
CBR_g38389 Chara braunii
Cc02_g29140 Coffea canephora
CDE08G1053 Ceratophyllum demersum
Ciclev10031582m.g Citrus clementina
CiPaw.13G011000 Carya illinoinensis
ClCG01G007660 Citrullus lanatus
COL.COLO4_25675 Corchorus olitorius
COL.COLO4_33459 Corchorus olitorius
Cpa.g.sc197.4 Carica papaya
Cre13.g607900 Chlamydomonas reinhardtii
CsaV3_5G024710 Cucumis sativus L.
CSS0034883 Camellia sinensis var. sinensis
CSS0050243 Camellia sinensis var. sinensis
DCAR_022352 Daucus carota
Dinv31492 Davidia involucrata
Dinv32048 Davidia involucrata
Duzib128G0351 Durio zibethinus
ECA234G1046 Erigeron canadensis
EL10Ac2g02850 Beta vulgaris
Eucgr.J01194 Eucalyptus grandis
FAN08G2254 Fragaria x ananassa
FAN13G1025 Fragaria x ananassa
FAN18G3275 Fragaria x ananassa
FvH4_5g29000 Fragaria vesca
Glyma.11G113800 Glycine max
Glyma.12G039666 Glycine max
Glyma.12G039732 Glycine max
Glyma.18G124100 Glycine max
Gohir.A10G241000 Gossypium hirsutum
Gohir.D10G253200 Gossypium hirsutum
Gorai.011G293500 Gossypium raimondii
GSVIVG01000664001 Vitis vinifera
GSVIVG01000839001 Vitis vinifera
GSVIVG01038299001 Vitis vinifera
HanXRQChr16g0525351 Helianthus annuus
Haze_03084 Corylus avellana
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla
HPP92_001013 Vanilla planifolia
Hund13332 Selenicereus undatus
Lalb_Chr03g0025471 Lupinus albus
Lj3g0019487 Lotus japonicus
Lj9A646T48 Lonicera japonica
Lsat_1_v5_gn_4_30541 Lactuca sativa
Manes.11G002900 Manihot esculenta
Mapoly0066s0082 Marchantia polymorpha
MBI19_g40603_MAGBIO Magnolia biondii
MCO02G103 Micromonas commoda
MD02G1293900 Malus domestica
Medtr4g071010 Medicago truncatula
MELO3C005130.2 Cucumis melo
Migut.B01206 Erythranthe guttata
MSTRG.20533 Avicennia marina
Nitab4.5_0000316g0120 Nicotiana tabacum
Nitab4.5_0013777g0020 Nicotiana tabacum
Nn7g36491 Nelumbo nucifera
Os05g0381500 Oryza sativa ssp. japonica
Peaxi162Scf00309g00328 Petunia axillaris
PGR142G3067 Punica granatum
PGSC0003DMG400000846 Solanum tuberosum
PGSC0003DMG400000847 Solanum tuberosum
Phvul.011G041800 Phaseolus vulgaris
Potri.001G024200 Populus trichocarpa
Pp3c21_7940 Physcomitrium patens
PRCOL_00006924 Prasinoderma coloniale
Prupe.2G029800 Prunus persica
Psat7g183120 Pisum sativum
PSO017G4843 Papaver somniferum
PSO063G6839 Papaver somniferum
PSO341G0002 Papaver somniferum
QL04p013757 Quercus lobata
RcHm_v2.0_Chr1g0326961 Rosa chinensis
RcHm_v2.0_Chr2g0113191 Rosa chinensis
RcHm_v2.0_Chr2g0154951 Rosa chinensis
RcHm_v2.0_Chr4g0400611 Rosa chinensis
RcHm_v2.0_Chr4g0400621 Rosa chinensis
RcHm_v2.0_Chr4g0400631 Rosa chinensis
RcHm_v2.0_Chr7g0221681 Rosa chinensis
Rhsim07G0062900 Rhododendron simsii
Sabra01G0018200 Salix brachista
SalBow1G3971 Salvia bowleyana
SalBow1G4178 Salvia bowleyana
SalBow5G2332 Salvia bowleyana
SalBow5G2661 Salvia bowleyana
Sc03g0006740 Simmondsia chinensis
Sc15g0003140 Simmondsia chinensis
Sc17g0003830 Simmondsia chinensis
Sed0017230 Sechium edule
SEGI_07819 Sequoiadendron giganteum
SEGI_25656 Sequoiadendron giganteum
SEGI_35855 Sequoiadendron giganteum
SGA_v2.0_scaffold249G44948 Striga asiatica
SMO145G0178 Selaginella moellendorffii
Solyc01g068470.4 Solanum lycopersicum
Sopen01g030430 Solanum pennellii
Sp4g21170 Schrenkiella parvula
TAR053G0001 Trochodendron aralioides
THA.LOC104824183 Tarenaya hassleriana
Thecc.10G006200 Theobroma cacao
Thhalv10016593m.g Eutrema salsugineum
TPR.G30507 Trifolium pratense
TWI63G1320 Tripterygium wilfordii
unitig_746.g26627 Utricularia gibba
vmacro13731 Vaccinium macrocarpon
VMungo1127G2196 Vigna mungo
Zm00001eb138540 Zea mays
Zm00001eb347150 Zea mays

User provided reference genes

Program Settings