Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p01900 Brassica napus
Aa31LG5G2090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis
Actinidia21051 Actinidia chinensis
Actinidia24827 Actinidia chinensis
AL6G50630 Arabidopsis lyrata
Aqoxy2G02954 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea
AT4G02440 Arabidopsis thaliana
ATR0796G303 Amborella trichopoda
Atru.chr5.1154 Acer truncatum
AUR62008638 Chenopodium quinoa
AUR62033135 Chenopodium quinoa
BcaB01g02041 Brassica carinata
BcaNung04054 Brassica carinata
BcaNung05002 Brassica carinata
BolC9t53130H Brassica oleracea
BraA09t35841Z Brassica rapa
C09p01980 Brassica napus
CAN.G1628.1 Capsicum annuum
CAN.G339.1 Capsicum annuum
CANSAT25G0541 Cannabis sativa
CARHR250710 Cardamine hirsuta
Carub.0006s3469 Capsella rubella
Ca_09155_v3 Cicer arietinum L.
Cc01_g20770 Coffea canephora
CDE05G1077 Ceratophyllum demersum
CDE11G0431 Ceratophyllum demersum
Cfa005921 Carpinus fangiana
Ciclev10021114m.g Citrus clementina
CiPaw.07G108000 Carya illinoinensis
CiPaw.08G095700 Carya illinoinensis
ClCG10G010870 Citrullus lanatus
COL.COLO4_23354 Corchorus olitorius
Cpa.g.c27813 Carica papaya
CsaV3_4G000750 Cucumis sativus L.
CSS0005125 Camellia sinensis var. sinensis
CSS0029794 Camellia sinensis var. sinensis
DCAR_002826 Daucus carota
DCAR_018339 Daucus carota
Dinv19699 Davidia involucrata
Dinv33051 Davidia involucrata
Duzib133G0671 Durio zibethinus
Duzib138G1290 Durio zibethinus
Duzib211G0390 Durio zibethinus
ECA236G0211 Erigeron canadensis
EL10Ac7g17501 Beta vulgaris
Eucgr.H01116 Eucalyptus grandis
FAN07G2129 Fragaria x ananassa
FAN15G0862 Fragaria x ananassa
FAN15G1997 Fragaria x ananassa
FAN27G1772 Fragaria x ananassa
FvH4_2g25611 Fragaria vesca
Glyma.02G018450 Glycine max
Glyma.03G214300 Glycine max
Gohir.A08G075600 Gossypium hirsutum
Gohir.A12G130800 Gossypium hirsutum
Gohir.D08G085100 Gossypium hirsutum
Gorai.004G089600 Gossypium raimondii
Gorai.008G145600 Gossypium raimondii
GSVIVG01028000001 Vitis vinifera
HanXRQChr04g0118021 Helianthus annuus
Haze_04922 Corylus avellana
Haze_04926 Corylus avellana
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla
HPP92_018255 Vanilla planifolia
HPP92_025206 Vanilla planifolia
Lalb_Chr06g0163461 Lupinus albus
Lalb_Chr18g0047021 Lupinus albus
Lj1g0011611 Lotus japonicus
Lj2P1193T28 Lonicera japonica
Lsat_1_v5_gn_5_191140 Lactuca sativa
Lsat_1_v5_gn_8_53521 Lactuca sativa
Manes.05G062500 Manihot esculenta
Mapoly0034s0045 Marchantia polymorpha
MBI19_g25350_MAGBIO Magnolia biondii
MD03G1287400 Malus domestica
MD05G1102200 Malus domestica
MD05G1102300 Malus domestica
MD11G1310800 Malus domestica
Medtr7g108820 Medicago truncatula
Medtr8g058520 Medicago truncatula
MELO3C017961.2 Cucumis melo
Migut.D00211 Erythranthe guttata
Migut.N01502 Erythranthe guttata
Nitab4.5_0001879g0020 Nicotiana tabacum
Nitab4.5_0008207g0010 Nicotiana tabacum
Nn3g21470 Nelumbo nucifera
Nn4g25798 Nelumbo nucifera
Oeu011455.1 Olea europaea
Oeu046686.1 Olea europaea
Os05g0365000 Oryza sativa ssp. japonica
Peaxi162Scf00001g00452 Petunia axillaris
PGR119G1100 Punica granatum
PGSC0003DMG400011401 Solanum tuberosum
Phvul.001G207000 Phaseolus vulgaris
Phvul.007G146000 Phaseolus vulgaris
Potri.002G205150 Populus trichocarpa
Potri.014G130000 Populus trichocarpa
Pp3c12_23190 Physcomitrium patens
Pp3c12_6520 Physcomitrium patens
Pp3c4_3650 Physcomitrium patens
Prupe.8G260500 Prunus persica
Psat3g022200 Pisum sativum
PSO170G2082 Papaver somniferum
PSO210G7211 Papaver somniferum
QL12p028562 Quercus lobata
RcHm_v2.0_Chr6g0293871 Rosa chinensis
Rhsim01G0284600 Rhododendron simsii
Sabra02G0154200 Salix brachista
Sabra14G0096600 Salix brachista
SalBow3G0280 Salvia bowleyana
Sc09g0004020 Simmondsia chinensis
Sed0014780 Sechium edule
Sed0022873 Sechium edule
SEGI_05916 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00372 Striga asiatica
SGA_v2.0_scaffold2G01399 Striga asiatica
SHI29059 Sapria himalayana
SMO331G0040 Selaginella moellendorffii
Solyc09g075080.3 Solanum lycopersicum
Sopen09g029900 Solanum pennellii
Sp6g02350 Schrenkiella parvula
TAR365G0052 Trochodendron aralioides
TAR370G0004 Trochodendron aralioides
THA.LOC109115977 Tarenaya hassleriana
Thecc.01G299500 Theobroma cacao
TPR.G9640 Trifolium pratense
TWI23G0499 Tripterygium wilfordii
TWI59G0946 Tripterygium wilfordii
unitig_0.g662 Utricularia gibba
VMungo0720G2164 Vigna mungo
VMungo1383G2661 Vigna mungo
Zm00001eb346660 Zea mays

User provided reference genes

Program Settings