Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p33310 Brassica napus
Aa31LG8G15730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis
Ah.13g077660 Amaranthus hybridus
AL3G51550 Arabidopsis lyrata
Aqoxy6G01133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea
AT2G18290 Arabidopsis thaliana
ATR0594G186 Amborella trichopoda
Atru.chr3.600 Acer truncatum
Atru.chr7.2312 Acer truncatum
AUR62020530 Chenopodium quinoa
AUR62034193 Chenopodium quinoa
AUR62043224 Chenopodium quinoa
BcaB08g34803 Brassica carinata
BcaC06g36396 Brassica carinata
BolC3t18168H Brassica oleracea
BolC7t40857H Brassica oleracea
BraA06t26260Z Brassica rapa
C03p59070 Brassica napus
C07p04570 Brassica napus
CAN.G53.17 Capsicum annuum
CANSAT01G2444 Cannabis sativa
CARHR108880 Cardamine hirsuta
Carub.0003s3246 Capsella rubella
Ca_22319_v3 Cicer arietinum L.
CBR_g49399 Chara braunii
Cc07_g09670 Coffea canephora
CDE04G3399 Ceratophyllum demersum
Ciclev10022394m.g Citrus clementina
CiPaw.02G018800 Carya illinoinensis
ClCG10G013900 Citrullus lanatus
COL.COLO4_22055 Corchorus olitorius
Cpa.g.sc6.131 Carica papaya
Cre13.g571850 Chlamydomonas reinhardtii
CsaV3_3G042790 Cucumis sativus L.
CSS0024834 Camellia sinensis var. sinensis
DCAR_025950 Daucus carota
Dinv38404 Davidia involucrata
Dinv39995 Davidia involucrata
Duzib264G1010 Durio zibethinus
ECA232G0363 Erigeron canadensis
EL10Ac4g07935 Beta vulgaris
Eucgr.I02428 Eucalyptus grandis
FAN08G2945 Fragaria x ananassa
FAN13G0528 Fragaria x ananassa
FAN18G2110 Fragaria x ananassa
FAN19G1519 Fragaria x ananassa
FAN23G1669 Fragaria x ananassa
FAN28G2376 Fragaria x ananassa
FvH4_1g13080 Fragaria vesca
FvH4_5g29620 Fragaria vesca
Glyma.02G055400 Glycine max
Glyma.16G138200 Glycine max
Gohir.A02G166400 Gossypium hirsutum
Gohir.D03G013600 Gossypium hirsutum
Gorai.003G013900 Gossypium raimondii
GSVIVG01018941001 Vitis vinifera
HanXRQChr09g0261331 Helianthus annuus
Haze_27504 Corylus avellana
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla
HPP92_023420 Vanilla planifolia
Hund21501 Selenicereus undatus
Hund21503 Selenicereus undatus
Lalb_Chr09g0333481 Lupinus albus
Lj2A454T58 Lonicera japonica
Lj4g0022669 Lotus japonicus
Lsat_1_v5_gn_4_151201 Lactuca sativa
Manes.01G136400 Manihot esculenta
Manes.02G095200 Manihot esculenta
Mapoly0106s0034 Marchantia polymorpha
MBI02_g12270_MAGBIO Magnolia biondii
MBI02_g17151_MAGBIO Magnolia biondii
MBI02_g23461_MAGBIO Magnolia biondii
MBI02_g42708_MAGBIO Magnolia biondii
MBI08_g40822_MAGBIO Magnolia biondii
MBI16_g04464_MAGBIO Magnolia biondii
MBI18_g01974_MAGBIO Magnolia biondii
MBI18_g16980_MAGBIO Magnolia biondii
MBI19_g45609_MAGBIO Magnolia biondii
MCO15G254 Micromonas commoda
MD02G1145400 Malus domestica
Medtr8g077200 Medicago truncatula
MELO3C026580.2 Cucumis melo
Migut.L00368 Erythranthe guttata
Migut.L00376 Erythranthe guttata
MSTRG.3592 Avicennia marina
Nitab4.5_0000136g0330 Nicotiana tabacum
Nitab4.5_0005482g0020 Nicotiana tabacum
Nn1g04949 Nelumbo nucifera
Oeu002799.2 Olea europaea
Oeu050374.1 Olea europaea
Os05g0579800 Oryza sativa ssp. japonica
Peaxi162Scf00008g03525 Petunia axillaris
PGR031G1764 Punica granatum
PGR083G1765 Punica granatum
PGSC0003DMG400015483 Solanum tuberosum
Phvul.003G254800 Phaseolus vulgaris
Potri.005G121700 Populus trichocarpa
Potri.007G023500 Populus trichocarpa
Pp3c7_6320 Physcomitrium patens
PRCOL_00001837 Prasinoderma coloniale
Prupe.7G156300 Prunus persica
Psat4g094240 Pisum sativum
PSO541G0643 Papaver somniferum
PSO675G1163 Papaver somniferum
QL06p046522 Quercus lobata
RcHm_v2.0_Chr2g0101251 Rosa chinensis
Rhsim11G0151400 Rhododendron simsii
Sabra05G0100200 Salix brachista
SalBow5G1882 Salvia bowleyana
Sc16g0002690 Simmondsia chinensis
Sed0008907 Sechium edule
SEGI_22782 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01321 Striga asiatica
SGA_v2.0_scaffold44G16541 Striga asiatica
SMO137G0236 Selaginella moellendorffii
Solyc02g062680.3 Solanum lycopersicum
Sopen02g013700 Solanum pennellii
Sp3g31700 Schrenkiella parvula
TAR101G0001 Trochodendron aralioides
THA.LOC104804235 Tarenaya hassleriana
THA.LOC104819776 Tarenaya hassleriana
Thecc.01G033400 Theobroma cacao
Thecc.01G208400 Theobroma cacao
Thecc.08G151500 Theobroma cacao
Thhalv10022866m.g Eutrema salsugineum
TPR.G24098 Trifolium pratense
TWI73G0320 Tripterygium wilfordii
unitig_37.g12363 Utricularia gibba
vmacro17823 Vaccinium macrocarpon
VMungo0251G3244 Vigna mungo
Zm00001eb294590 Zea mays
Zm00001eb342630 Zea mays

User provided reference genes

Program Settings